| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2377 |
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| Symbol | |
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| ID | 6159931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2582940 |
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| End bp | 2583824 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665146 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001791407 |
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| Protein GI | 171059058 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG TCCAGCTCCG CCACCTGATC GCGCTGGCCG AAAGCGGCTC GTTCAGCCGC
TCGGCCGAGG CGCTGTTCCT GACCCAGCCC GCGCTCAGCC GCAGCATCCG TGCGCTGGAG
GACGAACTCG GCCAGCCGCT GTTCGATCGC GTCGGCCGCC GCAACGAGCT GACGCCCTTC
GGCCGCGAGG TGCTGCACCG CGCCACCCAA CTGGTGTTCG ATGCCGACGA ACTGGGCGCG
AGCGGCCGCC AGATGCGCGA GGGTCTGGCC GGCAAGCTGC GCGTGGGCAT GGGATCGGGG
CCGGGGGCGC TGCTGATGAC GCCGCTGCTG CAGCAAATGG CCACCCACCA CCCGAGGGTG
CAGGTCGAGA TCGCCCGCGG CCAGACCGGT CTCCTGCTCG AAGCCCTGCG CGAGCGCCGG
CTCGACACGC TGGTGGTCGA CGCCCGTTCG GTGGCGCCGG CCGCCGATCT GCAGGTCGAC
AGCCTGGCCG AGATGCGCGG CGCCTTCATG TGCCGCCCGG ACCACCCGCT GACCCGCCGG
CGCAAGGCGT TGCGCTTCGA GGCGCTGCGG CCGTATCCGC TGGCCTCCAC GCCGCTCAGC
GACGAGGTGG CGCGCATCCT GATCGAACGC TACGGCCCGG CGGCGCACCC CGGCGAATGC
GTCACGCTGC GCTGCGAGGA GATCGCCAGC CTGGTCGAGG TGGTGCGCTC AAGCGACGCC
GTGCTGCTGG CGATCCGCGC GGCGGCGCCC GATCTGGTCG AACTGGAACT GACGCCGGCC
CTGAGCGCGC GCGCGCGCTT CGGCCTGGTG ACGCTGGCCG GCCGCGCGCA GGCGCCGGCC
TTGTCGATCG TGCGCCAGGT GATGGAGGCC TTGCTGCACG ACTGA
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| Protein sequence | MTLVQLRHLI ALAESGSFSR SAEALFLTQP ALSRSIRALE DELGQPLFDR VGRRNELTPF
GREVLHRATQ LVFDADELGA SGRQMREGLA GKLRVGMGSG PGALLMTPLL QQMATHHPRV
QVEIARGQTG LLLEALRERR LDTLVVDARS VAPAADLQVD SLAEMRGAFM CRPDHPLTRR
RKALRFEALR PYPLASTPLS DEVARILIER YGPAAHPGEC VTLRCEEIAS LVEVVRSSDA
VLLAIRAAAP DLVELELTPA LSARARFGLV TLAGRAQAPA LSIVRQVMEA LLHD
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