| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2369 |
|---|
| Symbol | |
|---|
| ID | 6160039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2573667 |
|---|
| End bp | 2574509 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641665138 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001791399 |
|---|
| Protein GI | 171059050 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGTT TGGATCCCGA TTCCCCGCTG TTGCCGGTCG CCGACGGCGT GGCGACCGAA
CGCACCGAGA TGGCCGGCGC GCAGACCCTG CGCCGTGGCC TGGCGGTGCT GCGGCTGTTG
ACACGCGTGG GCCCGGGGGG GCTGCGCATG AACGAGATCG GCCGCCGGCT GGCGCTCAAC
AAGTCGACCG CGATCCGGCT CACGCGCACG CTGGTCGACG AGGGCTTCGT GCTGCACGAC
CAGGTGTCGG GCGCCTACCG GCTCGGGCCC GAGGCCTTTG CGGTCGGGCT GGCGGCCGAG
CCGAGCTACG AACTGCAGCG CCTGGCCGCG CCGCTGATGC GCGCGCTGGC GCTGGAGTCG
GGCGACACGG TGTTCTTCAC GGTGCTGCAC GGCATCGACA GCATCTGCCT GTCGCGCACC
GAGGGCGACT TTCCGATCCG CAACCAGCTC GTCAAGGCCG GCGACCGCTG GCCGCTGGGC
GTGGGCGCGG GCAGCTGCGC GATGCTGGCG GCGCTGTCCG ATGCCGACAT CGACGACATC
CTGGCCCGCA ACGCCGCCCA GCGCGAGCAG GGCTACCCGC GCTGCACCGA CGCGGCGATC
CGCCAGCAGA TCCAGGAGAC GCGCCTGCAG GGCTACTGCT TCAACCCCGG CCTGGTGCTC
GAAAGCAGCT GGGCGCTCGG CGTGCCGGTC TACGACCTGC ACAACCGCCC GGTGGCCTCG
CTCAGCCTGG CGGCGATCGA GGCGCGCCTG GGCCCGGCGC GGCGCGCGGC ACTGGCGAAC
CGGCTGATGA AAGCCAGCCA GGAACTCCAT CAGCTGCAGC GCGAACAAGG CCCGGCCGGG
TAA
|
|---|
| Protein sequence | MPSLDPDSPL LPVADGVATE RTEMAGAQTL RRGLAVLRLL TRVGPGGLRM NEIGRRLALN
KSTAIRLTRT LVDEGFVLHD QVSGAYRLGP EAFAVGLAAE PSYELQRLAA PLMRALALES
GDTVFFTVLH GIDSICLSRT EGDFPIRNQL VKAGDRWPLG VGAGSCAMLA ALSDADIDDI
LARNAAQREQ GYPRCTDAAI RQQIQETRLQ GYCFNPGLVL ESSWALGVPV YDLHNRPVAS
LSLAAIEARL GPARRAALAN RLMKASQELH QLQREQGPAG
|
|---|
| |