| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2360 |
|---|
| Symbol | |
|---|
| ID | 6160018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2563727 |
|---|
| End bp | 2564875 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641665129 |
|---|
| Product | cellulose biosynthesis protein CelD |
|---|
| Protein accession | YP_001791390 |
|---|
| Protein GI | 171059041 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 93 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTG AAATCATCAC CGACCGCGCA GGCTTCGAAG CCATGCGTGA GCCTTGGGCA
CGACTGCAGG ATCGCATACC CGATACCAGT GTCTTCATGA CCTGGGAGTG GCAGCATCTC
TGGTGGAAAC ATTACGGCGA TGGCCAGGAG TTGCGCCTGC TGGTGGTGCG CGATGCCGGC
ATCGTGGTCG GGATCATGCC GCTCTATCTG CAGAACCGGC GGGTGCTGCG GCTGGTGCCG
GTGAAGATAC TGCGCAACGT CGGCACCGGT GGTGATACGG CGCCGGATTA TCTGGATCCG
CTGATCGATC CGGCGCAGGC CGACGAGATT GCCAATGTCC TGGTTCAAGC GATCCTGGAC
AAATCGCTGG CGTACGACCA GTTGCTGCTG GCGGATTTCA TCCCGGAATC GGCGTTTGCC
AGGACCTTGC GCAAGCACGT CGGCACGACG GATGCCAGGC GGCGTGAATC GGTATCGGCC
CGCATTTCGT TCATCACCTT GCCCGACAGC TGGGATGATT ATCTGGCAGG CCTGAGCGGT
GACCGCCGCA ACGTGATCCG GCGGTTTCGC CGCAAACTCG AGGTGCTGCC GGCGGCACGG
TTTTACACGT GGCAGGATCC GGCCACGCTG GACCGCGGCA TCGACCGCCT GATCGAGTTG
CACCTGAAAC GCTGGACCAA CCGCAGCGAC AGCCATGCAT TTTCAAGCAA GGCGTATGTC
GGGTTTCACC GCGAGGTGAT GCATGCCGCG ATGGAAAAGG GCTGGCTGCG GCTGTTCTGC
GTCGAGGCCG AAGGCCAGAT CATGGCGATG CTGTACTGCT ACCGCTACCG CGACCGGATG
TATTACTTCC AGGGCGGTTT CGACCCGGCG ATGTCGAAAC TGCGGCCCGG GCTGGTCCTG
ATGGGCCATG CGATCGAGCA GGCGATTCTC GAAGGCACCC GCACCTTCGA CATGCTGCGC
GGCGAATACG AGTTCAAGAC GCACTGGGCC AAGGAACGGC ACGAGACGGC ACAGATCGCG
GTCAGCCGCA TCACGCCGGC CGGCCTGACC TGGCACCTGC GCACCGAGAT CCTGCCGGCG
CTGAAGAAGC GCTTCGCGTC GGGCAACGCC TCCCGCCTGC CCTCGGTGGC GATGGCTGCG
GCCGACTGA
|
|---|
| Protein sequence | MQIEIITDRA GFEAMREPWA RLQDRIPDTS VFMTWEWQHL WWKHYGDGQE LRLLVVRDAG
IVVGIMPLYL QNRRVLRLVP VKILRNVGTG GDTAPDYLDP LIDPAQADEI ANVLVQAILD
KSLAYDQLLL ADFIPESAFA RTLRKHVGTT DARRRESVSA RISFITLPDS WDDYLAGLSG
DRRNVIRRFR RKLEVLPAAR FYTWQDPATL DRGIDRLIEL HLKRWTNRSD SHAFSSKAYV
GFHREVMHAA MEKGWLRLFC VEAEGQIMAM LYCYRYRDRM YYFQGGFDPA MSKLRPGLVL
MGHAIEQAIL EGTRTFDMLR GEYEFKTHWA KERHETAQIA VSRITPAGLT WHLRTEILPA
LKKRFASGNA SRLPSVAMAA AD
|
|---|
| |