| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2346 |
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| Symbol | |
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| ID | 6159723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2548426 |
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| End bp | 2549871 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641665115 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001791376 |
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| Protein GI | 171059027 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 133 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGT CAATATTGAT CATGCTCTCG GCCTTGGGGG CACTTGTTGT TGTAGGTATT
CAGGCTAGTC TGCTTTCTTG GGTCAAGAAA AACTTGGCCA TTTTTGAACT GTATATTCCG
TCAGTCTTGG TATCCCTGTC TGGCTTGGTA TTTCTCATCT CGGGGATGCT GACGGAGAGA
AACTTGCAGC TTGCGAGTCT TGCTGTAAAC TCAGTAGATC TGAATATTTC GCCATATGTA
AATTGGATTT CACGTGTTGC AAATCTATTT GTTCTGTCGT TGGGTGGTAG CTACCTGGTT
GTAAAAATTA TTGCCCATGT TTGGAGAAGC CGCGATGAGT CGGGTAATGC TTTGAAGTGG
TCTTTGTTTC CGAGGCTTAG TACACTCTTT TTATCTTTCG TTTTCATGTA CTTCATTTCC
CAGGTCTTTG GGACTGAGGG AGGTTTTGAG CAAAAACCGG TGTATTGGAT TATCGCTTTT
TCTGCAATGT TATTGTCGCC TGGCGCCGGT TTGATTGCTG GTCTTCGGTG TGCAAAGTTA
ATATTGCTTA TCTACATGGT TGTGTCGGTT TTATACATTG CATTGGATTT TAATCAAGTA
CTGGCGCCTG GATATAAGGG GGTTATTCCT GGGTTTTCAT ATCGTTTCTG GGGGCTTGCT
CCTCATGCGA ACGCAATCGG CCCTCTTGCT GCACTTCTGT TGTTTTTAGA GGTATCGGTG
CCCAGCAGAA GTTTTCTGGC AAGATCCTCA TTCTATTTGG TTGGAACTTT TGTTCTGATT
ATCTCTCAAT CAAAAACGTC TATTGGTGCA GCGATGGTTG GAATGGTAGT GGCTTCATTC
GCGTGTGGGA AAAGGAATGC TGATTATTCA GGACCATATG TTATGGGGCT GCCTCATGTG
ATAGCTGGTT TCGCATTATC TGCGGCGACT CTTGTCTTAT TAATGTTTTC GATAATCGGT
ATGCCAAGAG AACTTGCTTC TGTGGCGTCG AAAATTAATT CGGCGATTGA CTTTAGCACG
ATGTCGGGCC GGTCTGATAT TTGGCGAACA GCAATTTATG AGTTCGAGAG GAATCCAATG
TTCGGATATG GTCTTGGAAT TTGGGGGGCA GACTTCAGAG CTTCGATTGG GATGAATTAT
GCATATCATG CTCACAACCA ATTGCTTCAG TCTATGTCTG AATCTGGTGT GTGTGGAATT
CTAGGTTTCG GGGTTTTTTT TGTTGCTTCC CTGCTTTACT GCTTCAAGGC TAGGGTGTCT
ACCTACGGGG GTTCCGTTGC AATTTTTCTG TTGTTTACCT TTCGATGTAT AACGGAAGCG
CCTCTCAAGG TGGCTGCGAT AGGAACTGGT GAGACGTTTT TTTTACTTGT GCTGCTAATG
TTATGGGGAC TTGCAGATAA AAATACAGAG CGGTTGTGTG TCGGGCAATC GACGCCATTG
CCGTGA
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| Protein sequence | MTESILIMLS ALGALVVVGI QASLLSWVKK NLAIFELYIP SVLVSLSGLV FLISGMLTER
NLQLASLAVN SVDLNISPYV NWISRVANLF VLSLGGSYLV VKIIAHVWRS RDESGNALKW
SLFPRLSTLF LSFVFMYFIS QVFGTEGGFE QKPVYWIIAF SAMLLSPGAG LIAGLRCAKL
ILLIYMVVSV LYIALDFNQV LAPGYKGVIP GFSYRFWGLA PHANAIGPLA ALLLFLEVSV
PSRSFLARSS FYLVGTFVLI ISQSKTSIGA AMVGMVVASF ACGKRNADYS GPYVMGLPHV
IAGFALSAAT LVLLMFSIIG MPRELASVAS KINSAIDFST MSGRSDIWRT AIYEFERNPM
FGYGLGIWGA DFRASIGMNY AYHAHNQLLQ SMSESGVCGI LGFGVFFVAS LLYCFKARVS
TYGGSVAIFL LFTFRCITEA PLKVAAIGTG ETFFLLVLLM LWGLADKNTE RLCVGQSTPL
P
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