| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2345 |
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| Symbol | |
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| ID | 6159722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2547654 |
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| End bp | 2548394 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641665114 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001791375 |
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| Protein GI | 171059026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 132 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGC CGAAATTTTC CATAATTGTA TGTTGTTGGA ATAGTTCGGA TTATATTTCC
GACTGCATAA CCTCAATCAC AAGTCAATTT TACGAGGGGT TTGAGATAGT ATTTGTGGAT
GGAGGTTCTG AAGATGGAAC TCTCGAAAAA ATTGATGCCG TTACATGCAA AAAGGTGGTT
CTCAATAATA TAAGAGGGGG TATTTCAAAG GCAATGAATG CGGGGGTATC TGTTGCATCG
GGCGAAATTA TTGCGCACCT GCATGCAGAC GACTATTTTG CTAATTCAAG CGTTCTTTCG
CGAGTTGCTC GTGCATTTGA AGATAATGCG GGTACGAAGT GGCTCTATGG GAGATTTTAT
AATCTAAGGG ACGGTGTTCT TGCGCCGCCT TCTTATCCGG TCCGGAAGTA CTCCGTTCCG
ACGCTGATGC GAAGAAATAT TATTCCGCAT TGTGCAACTT TTATTATGAG GGACGTATTT
ATTCAGATGG GTGGATTTTC TGATAAATAT CGTCTTGCAA TGGACTATGA CTTATGGCTT
CGCCTCTCTA GGTGCTATGT TCCAGTTCAA ATGGACGAGT ATCTTGGCGT ATTCCGGCGG
CATGGTGAAA GTTCTACAAC AAAATTTGCA TTGCAGTCTT TTAATGAAGA CTTCTTGACC
CGGTTCAAAA ACTCTCCGCC TTATCTATGG CCGGAGTTCG CGCTGAGATA TGTTTACAGA
AGATTTCGAG AGGTTCGTTG A
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| Protein sequence | MDQPKFSIIV CCWNSSDYIS DCITSITSQF YEGFEIVFVD GGSEDGTLEK IDAVTCKKVV
LNNIRGGISK AMNAGVSVAS GEIIAHLHAD DYFANSSVLS RVARAFEDNA GTKWLYGRFY
NLRDGVLAPP SYPVRKYSVP TLMRRNIIPH CATFIMRDVF IQMGGFSDKY RLAMDYDLWL
RLSRCYVPVQ MDEYLGVFRR HGESSTTKFA LQSFNEDFLT RFKNSPPYLW PEFALRYVYR
RFREVR
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