| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2333 |
|---|
| Symbol | |
|---|
| ID | 6161113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2531215 |
|---|
| End bp | 2531625 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641665102 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001791363 |
|---|
| Protein GI | 171059014 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 123 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCGGT TAGTGCTGGA ACGCAAGCTC GAGTCGCTGC GACGCTGCCT TGTGCGTGTG
CGCAGCAAGT GCCCGGCCTC GCTGCCAGAA TTGCTCGGTG ATGTCGACGC TCAGGACGTG
CTGGTATTGA ACCTCAGTCG CGCCGTGCAG TTGTGTGTCG ACATGGCCGC ACACCTGCTT
TCCGAACTGG AACTGCCACC ACCGAACACG ATGGGTGAAA CGTTCACCCG ATTGACAGAA
GCGAGCGTGA TCGACGCAAC CTTGGCTCAA GCCATGCGCC GATCGGTCGG ATTCCGGAAT
TTGGCTGTCC ATAACTATGA CGAGATCGAC TGGGCCATCG TCTTCGCCAT TGCCACCCTG
CATCTGGATG ATTTCGAGCG ATTTGCGCAG CGAGTGACTG AACGATTGTG A
|
|---|
| Protein sequence | MDRLVLERKL ESLRRCLVRV RSKCPASLPE LLGDVDAQDV LVLNLSRAVQ LCVDMAAHLL
SELELPPPNT MGETFTRLTE ASVIDATLAQ AMRRSVGFRN LAVHNYDEID WAIVFAIATL
HLDDFERFAQ RVTERL
|
|---|
| |