| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2324 |
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| Symbol | |
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| ID | 6163637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2524416 |
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| End bp | 2525021 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641665093 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791354 |
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| Protein GI | 171059005 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 110 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGC GCACTGTCGT TTTCGCAGGG TTGCTTTCGG TCGCGGGCTG GTCTCAGGCG
GCTCCGGTGT TCGAGGACAA CTTCGACGCC AACACGCCGG CCGTGAACAC CGTGCCGACC
GGCTGGTTTC TGGGCGGTGG CACGGTGGAC ATCATCGGTA GCGGTTTCCT GTACGACTAT
GTGCCGGGCA ATGGCCTGTA TGTCGATCTG GACGGCTCCA CCTCCGAAGG TGGCACGCTG
TTCAAGTTTC TGAATCTGAC GGGCGGCACG ACCTATCAGC TGTCGTTCGA TCTGGCCGGC
AACAATGTGC CCAGTGGTGG ATATCCGTCC GATATCGTCG ACGTGACTTT CGGCAGTGCG
GCGGGCACCT ACACCCTGAA TCCCGGCGAT GGTTTTTCCA CCCGCACCCT GAGTTTCACG
GCGGGTGGCA ACGGCTCGTT TGCGCTGCTG TTCCACAACC GTGGTGGCGA CAATGCCGGC
GCCCTGCTCG ACAACGTCAG CGTGACGGCC GTGCCGGAGC CGGAAACCTA CGCGATGCTG
CTGGCGGGCC TGGGTGCGAT CGGCTTCATG CGGCGGCGGC GGCAGGCCCA GGCGCAGGAC
CAGTGA
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| Protein sequence | MKLRTVVFAG LLSVAGWSQA APVFEDNFDA NTPAVNTVPT GWFLGGGTVD IIGSGFLYDY
VPGNGLYVDL DGSTSEGGTL FKFLNLTGGT TYQLSFDLAG NNVPSGGYPS DIVDVTFGSA
AGTYTLNPGD GFSTRTLSFT AGGNGSFALL FHNRGGDNAG ALLDNVSVTA VPEPETYAML
LAGLGAIGFM RRRRQAQAQD Q
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