| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2291 |
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| Symbol | |
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| ID | 6161979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2480988 |
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| End bp | 2481716 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665061 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001791322 |
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| Protein GI | 171058973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAGA TTCGCACCTT TTTCAGACTT GCCTGCGTGG TCGCCCTGAC CGGCCTGGGC
CTGGGTGCGT CTGCTGCGCC GGTCGACGCC GGCGCCGCGC CTGTCGTGTC GACCGCCGTC
CCCGCCAAGC CGACCAATCT GATCGGCACC AGCGCCGACG CCGTGGCGCG ATTCCTTCAG
GAGTCCGGCG TGCTGGCCAG CACGGAGACT GCCGGTGCCT CGACCGACGC GCTGATGCAG
CAGGTGCGCA ACACCGCGTC CGATCTGGTG GTGTCGGCGA TGGATTTCCT GGGCGTCCGG
TATCGGCGTG GTGGCACGTC GGCCGACACC GGCTTCGACT GCAGCGGCTT CACCCGTCAC
GTGTTCGAGA ACAGCGTCGG CCTGCTGCTG CCGCGCCGCT CACGCGACCA GGCCAGCCTG
GCCGGCCTGC TGAACGTCAA GCGCGATGAA CTCAAGCCTG GCGATCTGGT GTTCTTCAAC
ACCATGCGCA GCGCGTTTTC GCACGTGGGC ATCTATGTCG GCGACGGCAA GTTCATCCAC
TCGCCGCGCA CGGGCAGCAC GGTGCGCATC GAAGACATGG GCGAGGCCTA CTGGACCAAG
CGCTTCAATG GCGCCCGGCG TGCGCCGAGC CTCGCCGAGT CGTCCTCGCT GTCGGCCAAG
CTCCAGGCCG AGGTTCAGGC CAAGACCTCG GCCTTTTCCG GCGACGCATC GGTTTCAGCC
ACCCGCTGA
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| Protein sequence | MLQIRTFFRL ACVVALTGLG LGASAAPVDA GAAPVVSTAV PAKPTNLIGT SADAVARFLQ
ESGVLASTET AGASTDALMQ QVRNTASDLV VSAMDFLGVR YRRGGTSADT GFDCSGFTRH
VFENSVGLLL PRRSRDQASL AGLLNVKRDE LKPGDLVFFN TMRSAFSHVG IYVGDGKFIH
SPRTGSTVRI EDMGEAYWTK RFNGARRAPS LAESSSLSAK LQAEVQAKTS AFSGDASVSA
TR
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