| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2249 |
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| Symbol | |
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| ID | 6163224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2455308 |
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| End bp | 2456990 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665019 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791280 |
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| Protein GI | 171058931 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG AGGTCATCCA CGGCCTGGTC GTCGACGTCG GCACGGCACT CGACCGGCTT
GACCACATTC CCGCTGGCAG CGAAAAGGTC GACGCGCCGC CGCCGGTGCT CATGGCGTAT
CAACAGGCCT GGATCGCCGA TGAGGCGCAG CTCAAGGTCA TGGAGAAGAG CCGCCGCACC
GGGTTGACCT GGTGCGAAGC GGCCGACGAC GTGCTGATCG CGTCGGCCGA AGGCGGCAGC
AACGTCTTCT ACATCTCCGC CAACCAGGAC ATGGCCCGCG AGTACATCGA GGCTGTGGCC
ATGTGGGCAA AGGCTTTCTC GTACGTGGCC AGCCAGATCG GCGAGGGCAT CTACGAAGAC
GATGTCGACC CCGAGAAGGG CCGGCGCTAC ATCAAGACCT TCGAAGTCAC GTTCCCGGCC
ACGGGGCGGC GCATCCTGGC GCTCAGCTCG CGTCCGACCA ACCTGCGCGG CAAGCAGGGC
GTGATCGTGA TCGACGAAGC CTCGTTCGCA CCCGAGCTGG CCGGCCTGAT CAAGGCTGCG
ATGGCCATGC TCCTGTGGGG CGACAAGGTG CGGATCATCA GCACCCACGA TGGCGTCGAG
AACCCGTTCA ACTCGTTGAT CGAGGAGGTG CGTGCCGGCA AGCGTGGATC TGCCGAGGTG
GCCACGGTGC ATCGCGTCAC CTTCGACCAG GCTGTCGATG CCGGCTTGTA TCGCCGCGTT
TGCCTACGCA AGGGTCTGGC CTGGACGCAG GCCGGCCAAG ACAAGTGGTC GACCGAAGCG
CGCGCCATGT ACGGCGACGA CGCGGCCGAA GAGCTCGACG TGATCCCTAG CCAGAGCGGC
GGCGCCTACC TGAGCCTGGC GCTGATCAGC CAGCGCATGG TGCCCGCCTG GTCGAGCACC
AACCCCACCG GACCGGTGCT GATCCGCGGC AAGTGGGACG ACGGCTTTGC CTACCTGCCC
GAGGATGTGC GGCGCTTCGC CATTGCCGGC TGGATTGCCG AGAACATCAC CCCGCACCTG
GCGCGCCTGA ACAAGTCGCT GCGCCATGTG TTCGGCAACG ACTTCGCCCG CAACCGTGAC
CAGAGCGTGA TCACGGTGCT GCATGAAGAC CTCGACCTGG TCGAGTACGT GCGCCTGGTG
GTCGAGCTGG CCAACTGCCC GTTCTCATCG CAGCAGCAGA TCCTGTTCGC GCTGATCGAT
GGCCTGCCGC GCTTCCGTGG TGGCGCGATG GATGCCACCG GCAACGGTGC GGCGCTGGCC
GAGGCCGCGG CGCAGCGCTA CGGCACGCAG ATGGTCGAGC AGGTGAAGCT GTCCGACGGC
TTCTACCTGG CGCACATGCC CAAGCTCAAG GCCGGCCTGC AGGACGCCAC GCTGGTCGAC
ATCCCCCGCG ACGATGCGCT GCGCGATGAC CTGCGCGCCA TCAAGCTGGT GCAGGGCGTG
CCCAAGCTGC CCAAGGCCGA CACGCAGAGC GCCGGGGCCA AGGCGGCCGC GGCCGACGGC
GGCGGCGGCA AGCTGCGCCG GCACGGTGAC TTCGCGATTG CGCTGTTCAT GGCGCACTAC
GCCTTCACGC GCGAAGCCGG CGAGATCGAC TTCATGGCGC TGCCATCCAA GGTCGAAGAG
TGGGGCGGCA AGGCGGATGA CGGCGATTTC GTGTCGTCGG CAGGCTGGGT GCGCGGCTTC
TAG
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| Protein sequence | MSDEVIHGLV VDVGTALDRL DHIPAGSEKV DAPPPVLMAY QQAWIADEAQ LKVMEKSRRT
GLTWCEAADD VLIASAEGGS NVFYISANQD MAREYIEAVA MWAKAFSYVA SQIGEGIYED
DVDPEKGRRY IKTFEVTFPA TGRRILALSS RPTNLRGKQG VIVIDEASFA PELAGLIKAA
MAMLLWGDKV RIISTHDGVE NPFNSLIEEV RAGKRGSAEV ATVHRVTFDQ AVDAGLYRRV
CLRKGLAWTQ AGQDKWSTEA RAMYGDDAAE ELDVIPSQSG GAYLSLALIS QRMVPAWSST
NPTGPVLIRG KWDDGFAYLP EDVRRFAIAG WIAENITPHL ARLNKSLRHV FGNDFARNRD
QSVITVLHED LDLVEYVRLV VELANCPFSS QQQILFALID GLPRFRGGAM DATGNGAALA
EAAAQRYGTQ MVEQVKLSDG FYLAHMPKLK AGLQDATLVD IPRDDALRDD LRAIKLVQGV
PKLPKADTQS AGAKAAAADG GGGKLRRHGD FAIALFMAHY AFTREAGEID FMALPSKVEE
WGGKADDGDF VSSAGWVRGF
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