| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2210 |
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| Symbol | |
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| ID | 6163312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2410484 |
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| End bp | 2411515 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664979 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001791241 |
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| Protein GI | 171058892 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.235033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA CGCTGTTTTC TCACATCTCC GGCGTGCGCC GCGAGTGGCT GCTGCTGGCG
ATCATCTCGG TGATCGTGCT GGCGGTCGGC GCGCGCGCGC CGGTGTTCCT GACCTGGCGC
AACGCGCTCG ACATCGGCAA CGACTCGGCC ATCCTCGCCA TCCTGGTGAT GGGCCAGATG
CTGGTGCTGC TGACACGCGG CATCGACCTG TCGGTGGCGT CCAACCTCGC GCTCACCGGC
ATGTTGTGCG CGCTGGCCGG GCGTACTTGG GCCGACATTC CGCTGCCGCT GCTGATCGCG
ATGGCCTGCG GCATCGGTGC CGGGCTCGGT TTCGTCAACG GCTGGCTGAT CATGCGCTTC
AACCTGCCGG CGATCGTCGT CACGCTCGGC ACGATGGCGG CCTACCGCGG TGCGGTGTTC
GTCTCCAGCG GCGGCGCCTG GGTGTCGGAT CAGGACATCC ATCCGCTCAT CAAGGGCCTG
CCGCGCGAGA CGCTGCTCGG CCTGCCGATG CTGATCTGGA TTGCCGCGAT CGTGGTGGCG
CTGGCGCTGT ACCTGCTGCG CTGGCGGCGC GAGGGGCGCG AGCTGTACGC CTTCGGCGGC
AGCCCGACGG CGGCGGTTTA TGCGGGCATC CCGGTGCTCG ACCGGCTGGT GATGGCCTAC
ACCTTGTCGG GCCTGCTGGC GGGCCTGGCC GGGCTGCTGT GGGTCGGGCG CTATTCGATC
GCCTTCAGCG AGCTGGCGTC GGGTTATGAA CTCACCGTGG TCGCGGCCTG CGTGATCGGC
GGCGTCAGCA TCGGCGGCGG CGTCGGTTCG ATCGGCGGCG CGGTGCTGGG CGTGCTGTTC
ATCGGCGTGA TCAACGGCGC GCTGCCGGTG ATCCAGGTTT CGCCGTTCTG GCAGCAGGCC
ATCGCCGGCG CCGTGATCCT GATCTCGGTG GTGCTCAACG CCCGCGCCGA CCGCGGCCAC
GGCCGACAGA TCCTGGAGCG GCCGCAGTCG CCCGCTCCGT CCAACACTGC AACTCAAGGA
GCCGCTGCAT GA
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| Protein sequence | MKPTLFSHIS GVRREWLLLA IISVIVLAVG ARAPVFLTWR NALDIGNDSA ILAILVMGQM
LVLLTRGIDL SVASNLALTG MLCALAGRTW ADIPLPLLIA MACGIGAGLG FVNGWLIMRF
NLPAIVVTLG TMAAYRGAVF VSSGGAWVSD QDIHPLIKGL PRETLLGLPM LIWIAAIVVA
LALYLLRWRR EGRELYAFGG SPTAAVYAGI PVLDRLVMAY TLSGLLAGLA GLLWVGRYSI
AFSELASGYE LTVVAACVIG GVSIGGGVGS IGGAVLGVLF IGVINGALPV IQVSPFWQQA
IAGAVILISV VLNARADRGH GRQILERPQS PAPSNTATQG AAA
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