| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2162 |
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| Symbol | |
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| ID | 6163709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2363124 |
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| End bp | 2364827 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664930 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791193 |
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| Protein GI | 171058844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0263323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC ACCCCTCCAG CGCGATGCGC TGCAACGGCC CCACGCCGGC CCGCCCCACC
CTGCTGACCG TCGCGGTCGC GGCAAGCCTG CTGAGCCCCG CCGCCTGGGC CTTCGAGATC
GACACCGGCA ACCCCGATCT CACGCTGCGC TGGGACAACA CGCTGCGCTA CAACCATGCG
GTGCGGGTCG AGCAGCGCGA CAGCAAGATC GGCAACTCGG CGCTGGCCGA CGAGGGCGAC
TACCGCTTCG ACAAGGGCGA CGCGGTGGCC AAGCGGCTCG ACATCCTGTC CGAGCTCGAC
CTGGTCTACG CCCGCGCGCA CGGCCTGCGC ATCAGCGCCG CCGGCTGGTA CGACGGCGCC
TACGACGGCC GCAGCCGCAC CAACCCGAAC CCGCCGTTCA CCAACATCCC GAGCTACGTC
GGCCAGCAGT ACAGCAGCAC CACCCAGCGC CTGTACCGCG GCGGCACCGG CGAGATCCTC
GACGCCTTCG TCTTCAGCCA GGCCAACCTG GGCGAGGTGC CGGTGCGCGC CAAGCTCGGC
CGCCACACGG TCTACTGGGG CGAGTCGCTG CTGCTGGGCG GCAACCTGCA CGGCGTGGCC
TATGCGCAGA ATCCGCTCGA CCTGCAGAAG GCCTTTGCCA CGCCGGGCGC CGAAGCCAAG
GAGCTGTTCC GCCCGCTCAA CCAGCTGTCG ATGCAGGCCC AGGTGAGCGA CACGCTGTCG
CTGGCGGCGC AGTACATGCT CGAGTGGGAG TCGTTCCGCT ACCCCGAGGG CGGCACCTAC
CTCGGCCCGG TCGACTTCGT CTTCAACGGC CCGGACCGCC AATGCGCCGC GGCCTGCGCC
ACGGCCACGC CGATCTTCGC CACCCGCGGC AACGCGGCCG AGCCGAAGCA GCGCGGCGAG
TTCGGCCTGT CGGCGCGCTG GAGCCCCGAG TGGCTCGACG GCACCGCCGG CCTCTACTAC
CGCCGCTTTG CCGACAAGCT GCCGCAGACG CTGATCACCC AGGGCGGTGC CAGCCCGCGC
TACAACCTGA TCTACGCCGA CGGCATCGAC CTGCTCGGCC TGAGCCTGGC CAAGAGCATC
GCCGGCGTGA GCGTCGGTGC CGAGCTGTCG ATGCGCCACA ACACGCCGCT GAACAGCCAG
GTGCTGGGCC CCGCCATCGG CCTGCCCGAA CCCGGTGAAA CCAGGGGCCC CCGCGGCGAC
ACGCTGCACG CGGTGCTCAA CGGCCTGGGC ACCATCAACA AGACGCCGGT CTTCGACGCC
GCCACCTGGG CCGCCGAACT GGTGTGGTCG CAATACACCC AGGTGCGCAG CGGCGCCAAC
CTGTTCAACG CGCTGGGCCA CACGCCCTGC AACGGCCGCG ACAAGTGGGA CGGCTGCGTC
ACCCGCAACT ACGTCGGCAT CGGCATGGGC TTCACGCCGA CCTGGTATCA GGTCGCACCG
GGCATCGATC TGTCGATGCC GCTGAACTAC GCGGTCGGCT TGAAGGGCAA CGCCGCCACC
GTCTTCGGCG GCAACGAGGG GCTGGGCAAC TACAGCGTCG GCCTGGGCGC GGACGTGCAC
CAGAAATACC GCATCGACCT CAAGTACATC GACTACATCG GCCGCTACCG CGACAACGGC
ACCGCGGTGA CCAGCACCAA CGGCCTGACC ACCTACCTGA AGGACCGCGG CTTCGTGAGC
CTGACGCTCA AGACCAGCTT CTGA
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| Protein sequence | MSTHPSSAMR CNGPTPARPT LLTVAVAASL LSPAAWAFEI DTGNPDLTLR WDNTLRYNHA
VRVEQRDSKI GNSALADEGD YRFDKGDAVA KRLDILSELD LVYARAHGLR ISAAGWYDGA
YDGRSRTNPN PPFTNIPSYV GQQYSSTTQR LYRGGTGEIL DAFVFSQANL GEVPVRAKLG
RHTVYWGESL LLGGNLHGVA YAQNPLDLQK AFATPGAEAK ELFRPLNQLS MQAQVSDTLS
LAAQYMLEWE SFRYPEGGTY LGPVDFVFNG PDRQCAAACA TATPIFATRG NAAEPKQRGE
FGLSARWSPE WLDGTAGLYY RRFADKLPQT LITQGGASPR YNLIYADGID LLGLSLAKSI
AGVSVGAELS MRHNTPLNSQ VLGPAIGLPE PGETRGPRGD TLHAVLNGLG TINKTPVFDA
ATWAAELVWS QYTQVRSGAN LFNALGHTPC NGRDKWDGCV TRNYVGIGMG FTPTWYQVAP
GIDLSMPLNY AVGLKGNAAT VFGGNEGLGN YSVGLGADVH QKYRIDLKYI DYIGRYRDNG
TAVTSTNGLT TYLKDRGFVS LTLKTSF
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