Gene Lcho_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2159 
Symbol 
ID6163706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2361052 
End bp2361717 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID641664927 
ProductDsbA oxidoreductase 
Protein accessionYP_001791190 
Protein GI171058841 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00324479 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAGA CACGGCTGGC CGTCGCGGCC CTGCTCATCG CCGCATTCGC CTTCATCGTC 
GGCACGCTCT ACTACAAGAG CGAAACCCTG CAGCAGTCCA CGACGGCGGT GCAGGACAAC 
CGACAGGCGC TGGTGCGGCC ACACGCGCCG GTGTTCGGCA ACGCCCAGGC CAAGGTGACG 
ATCGTGGAGT TCTTCGATCC GGCCTGCGAA ACCTGCCGGG CCTTCTACCC GATCGTCAAG 
GACATCATCC GGTCGGGCTT CGGCGAGGTG AACCTGGTGC TGCGCTACGC GCCGCTGCAC 
CAGGGCTCCG ACATCGCCAT CCAGATCCTG GAAGCGGCCC GGCAGCAGGA TCTCTACTGG 
CCCGTGCTCG AGAAGGTGCT CGAGACGCAG CCGATCTGGG CCGATCACGC CCAGCCGAAT 
CCGCAGCGGA TCTGGGAACT GCTCGACGGC ACCGGCCTCG ACATGGCCAG GGCCCGGGCG 
GCGATGAACG ACGTGGCGAT CAGGCAGGCC CTCGAGCAGG ACGTGGCCGA CATGGTCACG 
CTCAAGGTGA CGAAGACGCC CAGCTTCTTC GTCAACGGCA CGCCCTTGTC GCGCTTCGGC 
GTCGAGGAAC TGCGCACGCT CGTCAGCGAA GAACTCAGGC GCGCCAAGGC ACAGTCGCCG 
AAGTGA
 
Protein sequence
MNQTRLAVAA LLIAAFAFIV GTLYYKSETL QQSTTAVQDN RQALVRPHAP VFGNAQAKVT 
IVEFFDPACE TCRAFYPIVK DIIRSGFGEV NLVLRYAPLH QGSDIAIQIL EAARQQDLYW 
PVLEKVLETQ PIWADHAQPN PQRIWELLDG TGLDMARARA AMNDVAIRQA LEQDVADMVT 
LKVTKTPSFF VNGTPLSRFG VEELRTLVSE ELRRAKAQSP K