| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2143 |
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| Symbol | |
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| ID | 6163885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2344119 |
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| End bp | 2345084 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664911 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001791174 |
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| Protein GI | 171058825 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00101514 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATCA ACGAACTGCG CGCCATTTCC GTCTTCGTCA CGGCCGCCGA ACTGGGCAGC
CTGCGCAAGA CCGCCGCTGC GCTGAACATC AGTCCGCAGG CCGCCAGCCA GGCGCTGGCG
CAACTGGAGC AGCACCTGGA CGTGCGGCTG TTCCACCGCA CCACCCGCTC CATGGCGCTG
ACCGATGAAG GCCAGCGGTT TCTCGACGAG GCCCAGCCCT CGCTCCTGGG CCTGCGTCGG
GCCCTGCAGA CCGTCCGACA TGCCAAGGAC GAGATCGCCG GGCCGCTGCG CATCGTCGGC
CCGCGCGCCA CCTTCCAGCC TCTGCTCTGG CGGCTGCTGG ACGAGTTCTG CGTGCGCTAT
CCGGACATCG TGCCCGACGT CCAGCTGGAA GACCGGGTCG GCAACTGGGT CGAGGACCGG
GTGGATGTGG GCTTCCGGCT CGGCATCTCG CCCCATGAGG GCGTGATCGC GCGCCGGCTG
TTTCCGGTTC AGCTGGTGCT CTGTGCGTCA CCCGGCTACC TGCTCGCTCA TGGCGTGCCC
GACAGCATGG CGGCGTTGCC CACGCACCGC TGCAGCGTGT ACCGCAACCC GGGCACCGGG
CGCGTGGTGC CCTGGCGCTT CAAGGTGGGC GATGAAGAGG TGGAGCAGCC CGTCGTGCCT
GCGCTGAGCA CCAACGACGA GGTGCTGGAG TTGCACGCCG TCCTGGCCGG AAAGGTGATC
GGGCAACTGG CGGGCGTGAC GGCCGCGCCC TACATCCGGG CCGGGCAACT GGTGCCGCTG
CTGGTCGATC TCGTACCTGA CCGCTACAGC TACTTCGTCT ACTACGGCAG CCGCAGCGCG
CAGCCGGCAC GCGTGCGCGC CTTCGTTGAT CTGGCGGTGG CGCGGCTGGT CGACAACCCC
GAATACGTGT TGACCATGCG TGAAATGAAA TCGGCCGCGC GTGGTGCGCG AGTCTTGCCG
GATTGA
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| Protein sequence | MAINELRAIS VFVTAAELGS LRKTAAALNI SPQAASQALA QLEQHLDVRL FHRTTRSMAL
TDEGQRFLDE AQPSLLGLRR ALQTVRHAKD EIAGPLRIVG PRATFQPLLW RLLDEFCVRY
PDIVPDVQLE DRVGNWVEDR VDVGFRLGIS PHEGVIARRL FPVQLVLCAS PGYLLAHGVP
DSMAALPTHR CSVYRNPGTG RVVPWRFKVG DEEVEQPVVP ALSTNDEVLE LHAVLAGKVI
GQLAGVTAAP YIRAGQLVPL LVDLVPDRYS YFVYYGSRSA QPARVRAFVD LAVARLVDNP
EYVLTMREMK SAARGARVLP D
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