Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2140 |
Symbol | |
ID | 6162924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2343208 |
End bp | 2343354 |
Gene Length | 147 bp |
Protein Length | 48 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641664909 |
Product | hypothetical protein |
Protein accession | YP_001791172 |
Protein GI | 171058823 |
COG category | [S] Function unknown |
COG ID | [COG4680] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00438563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACGGCG TAGTGTTCAA CATCGGCGGC AACAAGTACC GGCTGGTGGT TGAAATGCAG TACCGCGCCG GCATCGCATG GGTGAAATTC ATCGGAACCC ACGCCCAGTA CGACAGGATC ATTGTGGAGA CCGTCAATGA CCATTAA
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Protein sequence | MNGVVFNIGG NKYRLVVEMQ YRAGIAWVKF IGTHAQYDRI IVETVNDH
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