| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2123 |
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| Symbol | |
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| ID | 6162712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2320383 |
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| End bp | 2324120 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664892 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001791155 |
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| Protein GI | 171058806 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.44593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CCGCCTGGCA GTTCTGGATC GACCGCGGCG GCACCTTCAC CGACGTGATC
GGCTGCGACG CCGACGACCG CCTGCACCCC CTCAAGCTGC TGAGCGAGAA CCCCGGCCAG
TACGCCGACG CGGCGGTCGA GGGCATCCGC CGGCTGCTGG GCCTGCGCCC CGGCGAACCG
ATCACGCCGC AGCGTGTGGC CTGCGTCAAG ATGGGCACCA CGGTGGCGAC CAACGCGCTG
CTGGAGCGCA AGGGCGAGCG CACGCTGCTG GTGACGACAC GCGGTTTCCG CGACGCGCTG
CGCATCGCCT GGCAGGCACG CCCGCAGCTG TTCGAGCGCC GGATCGTGCT GCCCGAACTG
CTTTACGAGA CGGTGATCGA GGCCGACGAG CGCATCGGCG CCGACGGCAC CGTCGTCACC
CCGTTCGATC CCGATGCCCT GCGCGCCCAA CTGCAGCAGG CCTTCGACAC CGGCCTGCGC
GCCTGCGCGA TCGTCTTCAT GCACGGCTGG CGCCACACCG CCCACGAGGC CGCCGCGGCC
GAGCTGGCGC GCGCGATCGG CTACACGCAG GTGTCGGTGT CGCACGAGGT CAGCCCGCTG
ATGAAGCTGG TCTCGCGCGG CGACACCACG GTGGTCGACG CCTACCTGTC GCCGATCCTG
CGCCGCTACG TCGACCGGGT GGCCGCGCAG ATGCCGGGCG TGCGGCTGTT CTTCATGCAG
AGCTCGGGCG GGTTGGCGCA GGCGCAGGCC TTTCATGGCA AGGACGCCGT GCTGTCGGGC
CCGGCCGGCG GCATCGTCGG CATGGTGCGC ACGGCGCTCG CCGCCGGGCA CCGGCAGGTG
ATCGGCTTCG ACATGGGCGG CACGTCGACC GATGTGTCGC ATTTCAGCGC CGCGGCGGGC
GAGGGCGGCG ACGCCCAGTT CGAGCGCGTC TTCGAGACCC AGGTGGCCGG CGTGCGCATC
CGCGCGCCGA TGATGGCGAT CCACACCGTC GCCGCGGGCG GCGGCTCGGT GATCCATTTC
GACGGCGCGC GGCTGCGCGT GGGGCCGCAC AGCGCGGGCG CCGATCCCGG GCCGGCCTGC
TACCGGCGCG GCGGGCCGCT GGCCGTCACC GACGCCAACC TGCTGCTGGG CAAGATCGCG
CCGGCGTTTT TCCCGCGCGT GTTCGGGCCC GACGCCGACC AGCCGCTCGA CCCCGCCGCC
GCGCGGGCCG GTTTTGCCGA TCTGGCTGAA CAAGTGACGC GAGCCAGCGG CCGGCCGACC
ACGCCCGAGC AGGTCGCGGC CGGCGCGCTA CAGATCGCGG TGGCGAGCAT GGCCAACGCG
ATCAAGCGCA TCTCGGTGGC CAAGGGGCAC GACGTCACGC GCTACACGCT GCAGTGTTTC
GGCGGCGCCG GTGGCCAGCA CGCCTGCGCG GTGGCCGATG CGCTGGGCAT GCAGCGGGTC
TGCATCCATC CGCTCGCGGG TGTGCTGAGC GCCTACGGCA TGGGGTTGGC CGATCAGCTG
GCGCTGCGCG AGGCCTCGCT CGAAATGGCG TTCGATGCGG CCGGACTGGC GGCGGCCCGG
GCGCGGTTGC TCGATCTGCA GAGCGCCGCC GCCGCCGAGC TGACGACGCA AGGCGTGGCG
AGCGACGGCC TGCGCATGCG CTGGCAGTTG CGGCTGCGCT ATCAGGGCAC CGACACCGCG
TTGGCGCTGA CGTGGGCACA GGTTGCGGCC CTGGATGCGG CGTCCGACGC CGCGTCGCTC
GACGCGCTGC GGCTCGATTT CGAGGCCGCC TACCGCCAGC GTTTCGCCTT CCTGATGCCG
GGCAGGCCGC TGCTGATCGA GGCGGTGGCG GTCGAAGTCG CCGCGCCCGG CCAGGGCCTG
CCGGCGGCTG CGCCCGAGGC TGTCGCCGTG CCCCATGTGC CGACCGCGCA CAGCGCCGTG
TCGGTCTACA CCGAGGCGAG CGACGGCACG CCGGGCTGGT GCGCGGCGCA GCTCTACCTC
GGTGCCGATC TGCGCCCGGG CGCCACGCTC ACCGGCCCGG CGATCGTGGC CGACCGCAAC
GCCACCACCG TGGTCGAGCC CGGCTGGCAG GCGACGCTCG ACGCGGCCGG CGTGCTGGAG
CTGCAGCGCG TGCTGCCACG CGCCTCGCGC CAGGCGCTGG GCACGGCGGT CGATCCGGTG
CTGCTGGAGG TCTTCAACCA GCTCTTCATG GCGATCGCCG AGCAGATGGG CCAGCGGCTG
CAGAACACCG CGCACTCGGT CAACATCAAG GAGCGGCTGG ATTTTTCGTG CGCGCTGTTC
GACGCCGACG GCGCCCTGAT CGCCAACGCG CCGCACATGC CGGTGCACCT GGGCTCGATG
GGCGAGGCGA TCCGCAGCGT GATCGAGCGC AACCCGGCGC TGCGGCCGGG CGACGTCTAC
GCGCTCAACG ACCCGTACCA CGGCGGCACG CACCTGCCCG ATGTCACCGT GGTCACGCCG
GTGTGGCTCG ACGGGGATGA CCGGCCCGCT TTCTACGTCG CCTCGCGCGG CCACCACGCC
GACATCGGCG GCATCAGCCC CGGCTCGATG CCGCCGTTCT CGACCACCAT CGCCGATGAA
GGCGTGCTGA TCGACAACTT CCTGCTCGCC CGCAGCGGCG TGCTGCGCGA GGCCGAACTG
CTGGCGCTGC TGGCCGGCGG CCCGTGGCCG GCGCGCAATC CGCAGCAGAA CCTGGCCGAC
CTGCGCGCGC AGATCGCCGC CAACCAGAAG GGCGTGCAGG AGCTGCAGTC GATGGTGGCG
CAATACGGCC GCGCCACCGT GGCGGCCTAC ATGCGGCATG TGCAGGACAA CGCCGAGGCC
TGCGTGCGCC GCGCCATCGG TGCGCTGCAG CAGGGCGGCC TCGGCACCGG CCGCTTCGAG
CTGCCGCTGG ACAACGGCGC GGTGGTGCGG GTGCAGGTCA GCGTCGACGC CGCCGAGCGC
AGCGCGGTGA TCGATTTCAG CGGCACCAGC GCGCAGTTGC CCAACAACTT CAACGCGCCC
AAGGCGGTCA CGCTGGCGGC CGTGCTGTAC GTGTTCCGTA CCCTGGTCGA CGACCAGATC
CCGCTCAACG CCGGCTGCCT CAAACCCTTG CAGGTGATCG TGCCCGCGGG CTGCATGCTC
AACCCGAACC CGCCGGCTGC GGTGGTGGCC GGCAATGTCG AGACCTCGAC CTGCGTCACC
AACGCGCTCT ACGGCGCGCT CGGCGTGATG GCGGCGGCGC AGTGCACGAT GAACAACTTC
ACCTTCGGCA ATGCACGCCA CCAGTATTAC GAGACGATCT CCGGCGGCTC GGGTGCCGGC
GGGCTGTTCG ATGCGCAGGG TGCGCTGGTC GGCGGTTTCG ACGGCACCAG CGTGGTCCAG
ACCCACATGA CCAACTCGCG CCTGACCGAC CCCGAGGTGC TCGAATGGCG CTTCCCGGTG
CGGCTGGAGT CGTACGCGAT CCGCACCGGA TCGGGCGGCG CCGGGTCTTG GCGCGGTGGC
GACGGCGGCA CGCGGCGCAT CCGTTTCCTC GAGCCGATGA GCGCGGGCAT CCTCAGCAAC
GGCCGCACGC AGGGTGCGTT CGGCCTGGCC GGGGGCTCGG CCGGGCAGGT GGGCGCCAAC
CGCATCGAAC GCGCCGATGG CCGCGTCGAG CCGCTCGGCC ACATCGGCGC GGTCGAGGTG
GGCGTCGGCG ACGTGTTCGT GATCGAGACG CCCGGCGGTG GTGGCTTCGG CCGCGGCCTG
AATGACCCGG CAACATGA
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| Protein sequence | MSDAAWQFWI DRGGTFTDVI GCDADDRLHP LKLLSENPGQ YADAAVEGIR RLLGLRPGEP
ITPQRVACVK MGTTVATNAL LERKGERTLL VTTRGFRDAL RIAWQARPQL FERRIVLPEL
LYETVIEADE RIGADGTVVT PFDPDALRAQ LQQAFDTGLR ACAIVFMHGW RHTAHEAAAA
ELARAIGYTQ VSVSHEVSPL MKLVSRGDTT VVDAYLSPIL RRYVDRVAAQ MPGVRLFFMQ
SSGGLAQAQA FHGKDAVLSG PAGGIVGMVR TALAAGHRQV IGFDMGGTST DVSHFSAAAG
EGGDAQFERV FETQVAGVRI RAPMMAIHTV AAGGGSVIHF DGARLRVGPH SAGADPGPAC
YRRGGPLAVT DANLLLGKIA PAFFPRVFGP DADQPLDPAA ARAGFADLAE QVTRASGRPT
TPEQVAAGAL QIAVASMANA IKRISVAKGH DVTRYTLQCF GGAGGQHACA VADALGMQRV
CIHPLAGVLS AYGMGLADQL ALREASLEMA FDAAGLAAAR ARLLDLQSAA AAELTTQGVA
SDGLRMRWQL RLRYQGTDTA LALTWAQVAA LDAASDAASL DALRLDFEAA YRQRFAFLMP
GRPLLIEAVA VEVAAPGQGL PAAAPEAVAV PHVPTAHSAV SVYTEASDGT PGWCAAQLYL
GADLRPGATL TGPAIVADRN ATTVVEPGWQ ATLDAAGVLE LQRVLPRASR QALGTAVDPV
LLEVFNQLFM AIAEQMGQRL QNTAHSVNIK ERLDFSCALF DADGALIANA PHMPVHLGSM
GEAIRSVIER NPALRPGDVY ALNDPYHGGT HLPDVTVVTP VWLDGDDRPA FYVASRGHHA
DIGGISPGSM PPFSTTIADE GVLIDNFLLA RSGVLREAEL LALLAGGPWP ARNPQQNLAD
LRAQIAANQK GVQELQSMVA QYGRATVAAY MRHVQDNAEA CVRRAIGALQ QGGLGTGRFE
LPLDNGAVVR VQVSVDAAER SAVIDFSGTS AQLPNNFNAP KAVTLAAVLY VFRTLVDDQI
PLNAGCLKPL QVIVPAGCML NPNPPAAVVA GNVETSTCVT NALYGALGVM AAAQCTMNNF
TFGNARHQYY ETISGGSGAG GLFDAQGALV GGFDGTSVVQ THMTNSRLTD PEVLEWRFPV
RLESYAIRTG SGGAGSWRGG DGGTRRIRFL EPMSAGILSN GRTQGAFGLA GGSAGQVGAN
RIERADGRVE PLGHIGAVEV GVGDVFVIET PGGGGFGRGL NDPAT
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