| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2110 |
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| Symbol | |
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| ID | 6161348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2305795 |
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| End bp | 2306946 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664879 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791142 |
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| Protein GI | 171058793 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4335] DNA alkylation repair enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.498409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAA TGCCGGTCAT GGCTGACGCA TTCAAGAACC TGATCAACCC CGCCACCGTC
GCGGCGATGG CGCAGCACCT CGGGCGGGTC AGCGCGCATT TTGATCACGA CGCCTTCGTC
GCGCGCGCCT TGCCCGATCT CGACGGCCTC GAATTCAAGG CCCGCGCGAT GCAGCTGGCC
GACGCGCTCG AGCAGGCGCT GCCGGCCGAT TTCAGCCTGG CGTCGCAGGC GCTGGTGAAT
GCGCTCGGGC CGCCGGGGCA GGGCGACGAT CTGAGCGGGC TGCGGACCGG CGATCAGGGC
CTGGCCGGCT GGGCGCTGTG GCCGATGGGC GAGTTCATCG CCCGCCACGG CCTGGCCGAT
CCCGCGCGCG GGCTGCAGGC GCTGCACGCG ATGACACAGC GTTTCAGCGC CGAGTTCGCG
ATCCGGCCGT TCATCCTGGC GCATCCGCAG CTGACGTTCG AGACCCTGGC GCGCTGGGTG
CACGACCCGA GCGCACATGT GCGCCGACTG GTCAGCGAGG GCAGCCGCCC GCGCCTGCCG
TGGGGCCTGC AGCTCAAGCC GCTGATCGCC GACCCGAGCC CGACGCTTGC GCTGCTGGCC
GCGCTGCAGG ACGACCCCAG CGCCTACGTG CGCCGCTCGG TCGCCAATCA TCTCAACGAC
ATCGCCAAGG ATCATCCCGC GCGCGTGGCC GAGTGGCTGC AGCGCCATCT GCCCGATGCG
TCCGACAACC GCCGGGCGCT GCTGCGCCAC GCCAGCCGCA CGCTGATCAA GCAGGGTGAC
GCCGCGGTGC TGACGGCCTG GGGCCTGGGC GCCGAACTGC ACGGCCAGGC GGCGCTGCGC
ATCGGGCCGG CGCGCATCCG GCTGGGCGAA GCCGTCGAGC TGAGCCTGAC GCTGCGTTCG
ACCGCAGCCG CCGCGCAGGC GCTGGTGGTC GACTACGTGG TGCACCACGT CAAGGCCGGC
GGCAGCACGT CGCCCAAGGT CTTCAAAGGC TGGCGCGTGC AACTGGCGGC GGGCGAGCAG
CGGCTGCTCA GCCGCCGCCA CAAGGTGACG CCGATCACCA CCCGCACCTA TCACGCGGGT
TGGCATCGCG TGCAGGCGCA GGTCAACGGA CGGGTGGTGG CCGAAGCGGG GTTCGAGCTG
GGTGTCGATT GA
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| Protein sequence | MATMPVMADA FKNLINPATV AAMAQHLGRV SAHFDHDAFV ARALPDLDGL EFKARAMQLA
DALEQALPAD FSLASQALVN ALGPPGQGDD LSGLRTGDQG LAGWALWPMG EFIARHGLAD
PARGLQALHA MTQRFSAEFA IRPFILAHPQ LTFETLARWV HDPSAHVRRL VSEGSRPRLP
WGLQLKPLIA DPSPTLALLA ALQDDPSAYV RRSVANHLND IAKDHPARVA EWLQRHLPDA
SDNRRALLRH ASRTLIKQGD AAVLTAWGLG AELHGQAALR IGPARIRLGE AVELSLTLRS
TAAAAQALVV DYVVHHVKAG GSTSPKVFKG WRVQLAAGEQ RLLSRRHKVT PITTRTYHAG
WHRVQAQVNG RVVAEAGFEL GVD
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