Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2040 |
Symbol | |
ID | 6161948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2217037 |
End bp | 2217831 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641664809 |
Product | ABC transporter-related protein |
Protein accession | YP_001791072 |
Protein GI | 171058723 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0865072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG CCCAGAACCT CGAGATCACG TTCAACCCCG GCACCCCGAT CGAGAACCGC GTGCTGCGCG GCCTCGACCT CGAGATCCCG ACCGGCCAGT TCGTCACCGT CATCGGCTCC AACGGCGCCG GCAAGTCGAC CTTTTTGAAC GCCGTCAGCG GTGACCTGAT GGTCGACCGC GGCACCATCC ACATCGACGA CACCGACGTT ACCCGCCGCG CCGCCTGGCA GCGTTCGGAC CTGGTCGCCC GGGTGTTTCA AGACCCGATG GCCGGCACCT GCGAGAGCCT GACGATCGAG GAAAACATGG CGCTGGCCTG GAAACGCGGC GCCGGCCGCG GCCTGGGTTT TTCGCTCAAC CGCCACCTGC GCGAGCTGTT CCGCGACAAG CTGTCGATCC TGAAGCTGGG CCTCGAAAAC CGCCTGGCCG ACCGCATCGG CCTGCTGTCG GGCGGCCAGC GCCAGGCGGT GAGCCTGCTG ATGGCGTCGC TGCAGCCGTC GCGCATCCTG CTGCTCGACG AGCACACCGC CGCGCTCGAT CCCAAGACCG CCGCCTTCGT GCTCGAACTC ACCGACCGCA TCGTCGAAGG CGCGAAGCTG ACCGCGATGA TGGTCACGCA CAGCATGCGC CAGGCGCTCG ACCACGGCTC GCGCACCGTG ATGCTGCACG AGGGGCGCGT GATCCTGGAT GTGTCCGGCC CGCAGCGCGC CGGCATGGAC GTGGCCGACC TGCTGCACCT GTTCGAGCAG ACCCGCGGCG AAAAGCTCGA CGACGACAAG CTGCTGCTGG CGTGA
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Protein sequence | MLRAQNLEIT FNPGTPIENR VLRGLDLEIP TGQFVTVIGS NGAGKSTFLN AVSGDLMVDR GTIHIDDTDV TRRAAWQRSD LVARVFQDPM AGTCESLTIE ENMALAWKRG AGRGLGFSLN RHLRELFRDK LSILKLGLEN RLADRIGLLS GGQRQAVSLL MASLQPSRIL LLDEHTAALD PKTAAFVLEL TDRIVEGAKL TAMMVTHSMR QALDHGSRTV MLHEGRVILD VSGPQRAGMD VADLLHLFEQ TRGEKLDDDK LLLA
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