| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2017 |
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| Symbol | |
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| ID | 6160701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2187854 |
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| End bp | 2189479 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664786 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_001791049 |
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| Protein GI | 171058700 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.807399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAT CTCAGCATTC GGATAATTTG CCGGTGGTTA TCGTCGGCGC GGGTTTGGCG
GGACTCACCG TGGCCTTGCA ACTGGCGCAA CAGGCGCGCC CGGTGATCGT TCTCGCCAAA
CGCAACCTCG AGGAAGGAGC CACCGCCTGG GCTCAGGGCG GCATCGTCGG CGTCCTGGGC
GGTGACGACA GCATCGACAG TCATGTGCGC GACACCCAGG ATGCCGGCGC CGGCCTCGTC
GACGAGCACA CGGCCCGTTT CATCGCCGAG CGCAGCGCCG ACGCGGTGGC CTGGCTGGTC
GATCGCGGCG TGCCCTTTTC GGCCGACCCC AGCGGCCCGC TCGGCCTGCA CCTGACGCGC
GAGGGGGGCC ACGCGGTGCG TCGCATCGCC CATGCGGCCG ACGCCACCGG CAAGGCGATC
CACGACGCGC TGCTCGCCGA GGTGGCCCGC CACCCGAACA TCTCGCTGCG CGAACGCTGG
ATGGCGGTCG ACATCGTCAC CTCGCGCCAG ATCAAGCGCG ACGAGGCGCC GCGCTGTTAT
GGCATCTATG CGCTCGACAT CGACAGCCAG CGGGTCGAGA CACTCGATGC CAGCGCCGTG
GTGCTGGCCA GCGGCGGTGC GGGCAAGGTC TACCGCTACA CCACCAACCC GGACACCTCC
ACCGGCGACG GCATCGCGAT GGCCTGGCGC GCGGGCTGCC GGGTCGGCAA CATGGAGTTC
ATCCAGTTCC ATCCGACCTG CCTGTACCAC CCGCAGGATC GCAGCTTCCT GATCACCGAG
GCCTTGCGCG GCGAGGGTGG CGTGCTCAAG CTGCCCGACG GCACGCGGTT CATGCCCGCG
CACGACCCCC GCGCCGAGCT GGCACCGCGC GACGTGGTCG CCCGGGCGAT CGACTTCGAG
ATGAAGCGAC ACGGCGTCGA CCACGTCTGG CTGGACGCCA CCCACCTCGG CGAAGAGTTC
CTGAAGGAGC ACTTCCCGAC CATCCACGCC CGCTGCCTGG CGCTGGGCAT CGACATCGCG
CGCCAGCCGA TCCCGGTGGT TCCGGCGGCC CACTACACCT GTGGCGGCGT GGTCACCGAC
CTCAACGGCC GCACCGATCT GCCCGGTCTG TACGCGGTGG GCGAGGCCAC CTACACCGGT
CTGCACGGCG CCAATCGCCT GGCCAGCAAT TCACTGCTCG AGTGCGTGGT GCTGGGCCGC
AGCTGCGCCG AAAACATCAT CGCGCGTGGC ACCGAAACCC GGCCGGCACT GCCGGCCTGG
GACGAAAGCC AGGTGGAGAA CGCCGACGAG CAGGTGGTGA TCTCGCACAA CTGGGACGAG
CTGCGCCTGC TGATGTGGAA CTACGTCGGC ATCGTGCGCA CCACGCGCCG GCTCGAGCGC
GCACTGCATC GCATCGAGTT CCTGCGCAGC GAGATCGACG ACTACTACGC CAACTTCCGG
GTCAACCGCG ACCTGCTGGA GTTGCGCAAC CTGGTCGATT GCGCCGAGCT GATCGTGCGC
TCCGCGCTGA TGCGGCATGA AAGCCGCGGG CTGCATTACA GCCGCGACTT CCCGGACACG
CTGCCGGTGA GCTTCCCGAC CATCCTGGTG CGCGAGGCCA AGCGCCGGCC GATGCACGGC
GCCTGA
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| Protein sequence | MTSSQHSDNL PVVIVGAGLA GLTVALQLAQ QARPVIVLAK RNLEEGATAW AQGGIVGVLG
GDDSIDSHVR DTQDAGAGLV DEHTARFIAE RSADAVAWLV DRGVPFSADP SGPLGLHLTR
EGGHAVRRIA HAADATGKAI HDALLAEVAR HPNISLRERW MAVDIVTSRQ IKRDEAPRCY
GIYALDIDSQ RVETLDASAV VLASGGAGKV YRYTTNPDTS TGDGIAMAWR AGCRVGNMEF
IQFHPTCLYH PQDRSFLITE ALRGEGGVLK LPDGTRFMPA HDPRAELAPR DVVARAIDFE
MKRHGVDHVW LDATHLGEEF LKEHFPTIHA RCLALGIDIA RQPIPVVPAA HYTCGGVVTD
LNGRTDLPGL YAVGEATYTG LHGANRLASN SLLECVVLGR SCAENIIARG TETRPALPAW
DESQVENADE QVVISHNWDE LRLLMWNYVG IVRTTRRLER ALHRIEFLRS EIDDYYANFR
VNRDLLELRN LVDCAELIVR SALMRHESRG LHYSRDFPDT LPVSFPTILV REAKRRPMHG
A
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