| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2008 |
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| Symbol | |
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| ID | 6162369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2178025 |
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| End bp | 2178891 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664777 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001791040 |
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| Protein GI | 171058691 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00218078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACTGC CTGAACTTGC CGTCCCGCCG GTCGACACCG GACAACTCGC CACGCTGGTG
CGCGACATCG GCATCCCGCC GCGACCGCAG CTGCTCGAGC GCCTGCACAC CGAACTGCTG
CGCGACGAGC CGCGCCAGGA CATGCTGGTG CAGCTGGCCT CCTACGACGT GGCGGTGGCC
GCCGCGCTGC TGAAGGTGGC CAACGCGCGC TGGCCCGGCG TGCCTCGCGC CGCCGGCACG
CTGCGCCGGG CGTTCGAGCA ATTGGGCAAT CAGCGCTGCA TCGCCATCCT CAGCGCGCTG
GTGCTGCGCA AGGTGCTGCC GGTGCGCGGC CCGAGCCTGG AGCGGTTCTG GGACGTGGCG
CATCGCCGCA GCCTGGCGAT GAGCTGGCTG GCGCGCCAGC ACGGCGTGAT CGAGCCCGAC
GTGGCGCACA CCTTCGGGTT GTTCTGCGAC GTCGGCATCG CGGTGCTGAT CCAGCGTTTC
GAGCAGCCCA GCTACCGCGT CACGCTGGCC GAGGCCAACC TCGGCCGGCG CCCGTTCACC
GAGGTCGAGA ACGCCCGGCA CGGCACCGAT CACGCGGTGG TCGGCGCGGC GCTGGCGCAC
AGCTGGGGCG TCAGCGCCGA GATCGTCGAG GCGGTGCGCC TGCACCACGA CTACCGCGTC
TTCGCCAACC CCGCGACCCC GCGGCTGCGC CACCTGATCG CGCTGGCGCT GCTGGCCGAG
CGCTTCCTGC AGCGCCAGCA AGGCCGCAAC CGGCACGGCG AGTGGGAGCG CGGCGGCGCC
CAGGCGCTGC TGGCACTGGG CGTCAACGCG CGTGAGTTCG ACGTCTGGTG CGACGAACTG
CAGACCCTGC TCGAACTGGA TTTCTGA
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| Protein sequence | MSLPELAVPP VDTGQLATLV RDIGIPPRPQ LLERLHTELL RDEPRQDMLV QLASYDVAVA
AALLKVANAR WPGVPRAAGT LRRAFEQLGN QRCIAILSAL VLRKVLPVRG PSLERFWDVA
HRRSLAMSWL ARQHGVIEPD VAHTFGLFCD VGIAVLIQRF EQPSYRVTLA EANLGRRPFT
EVENARHGTD HAVVGAALAH SWGVSAEIVE AVRLHHDYRV FANPATPRLR HLIALALLAE
RFLQRQQGRN RHGEWERGGA QALLALGVNA REFDVWCDEL QTLLELDF
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