Gene Lcho_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1965 
Symbol 
ID6163832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2131379 
End bp2132011 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID641664734 
Producthypothetical protein 
Protein accessionYP_001790997 
Protein GI171058648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAG CAAACCACCT GGTCCTGCTG GTGGAGGAGC CTTCGATGGA GGCCTTCCTG 
CACGCGTTGT TGCCGCGCCT GATGCCGGCA CGACGCACGT TCGAGATCCA CCCGTTCCAG 
GGCAAGGACG ACCTGATGGC CAAGCTGGAG GCTCGCCTGC GCGCCTATGC GCAATGGCTG 
CCCGATGACT GGCGTGTGCT GGTGATCGTG GACAGGGACG ACGAGGACTG CAAGGCCCTC 
AAGTCGCGGA TGGAAGCCAT CGGCACCCGC GCCGGCCTGC TGACGCGCAC ACGGGCCGTC 
GCGGCGGCCG GCCACGGCGA CTGGCAACTG GCCAACCGCA TCGCCGTCGA GGAGTTGGAG 
GCCTGGTACT TCGGCGACTG GCCCGCCGTG CAGGCCGTGT ACCCGAAGCT GCCCGACGGG 
GTGCCCAAGA GCCGTGGCTT GCGTGACCCG GATGCCATCA CGGGCGGCAC CTGGGAGGCC 
TTCGAGCGTG TGCTGCAGCG CCACGGCTAC GCCAAGGCCG GGCTGGCCAA GATCGAGGCG 
GCGCGAGCCA TCGGTCGGCA TATCGAGCCC AGCCGAAGCC GGTCACCGAG CTTCCTGGCG 
TTTCATGCGG CCTTGGCGGA GGCGTTGGTG TGA
 
Protein sequence
MPAANHLVLL VEEPSMEAFL HALLPRLMPA RRTFEIHPFQ GKDDLMAKLE ARLRAYAQWL 
PDDWRVLVIV DRDDEDCKAL KSRMEAIGTR AGLLTRTRAV AAAGHGDWQL ANRIAVEELE 
AWYFGDWPAV QAVYPKLPDG VPKSRGLRDP DAITGGTWEA FERVLQRHGY AKAGLAKIEA 
ARAIGRHIEP SRSRSPSFLA FHAALAEALV