| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1936 |
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| Symbol | |
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| ID | 6160441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2099299 |
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| End bp | 2099727 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664702 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001790968 |
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| Protein GI | 171058619 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.211581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATCC ACTTTGCCGA CGGCGCTGAC GACGACGCGC CGATCATGGA CATCAACACC
ACGCCGCTGA TCGACGTGAT GCTGGTGCTG CTGGTGATGC TGATCATCAC GATTCCGGTT
CAGTTGCACG CGGTGAACCT GAACCTGCCG GTGGCCAAGG CCACGCCGCC GCCGATCAAG
CCCGAGGTGA TCCGCATCGA CATCGACGCC CGCAACGTCG TGTCGTGGAA CGGCCAGCCG
CTGGCCGACC GAGCCGACCT TGAGTTGCGC ATGGCCGCCG CGGCGCAACA GACGCCGCAG
CCCGAGATCC ACCTGCGCCC GGATCGCCGC ACCAGATACA AGGCGGTGGC CGAGGTGCTG
GTGTCGGCCG ATCGCCTGGG CTTGCGCAAG CTGGGCGTGC TCGGCAACGA GTCGCTGGCC
GCGCGCTGA
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| Protein sequence | MAIHFADGAD DDAPIMDINT TPLIDVMLVL LVMLIITIPV QLHAVNLNLP VAKATPPPIK
PEVIRIDIDA RNVVSWNGQP LADRADLELR MAAAAQQTPQ PEIHLRPDRR TRYKAVAEVL
VSADRLGLRK LGVLGNESLA AR
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