| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1918 |
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| Symbol | |
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| ID | 6159875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2077934 |
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| End bp | 2080588 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664682 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001790950 |
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| Protein GI | 171058601 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.151624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC TGCACGCCTC CACCCTTGAC GACGTGCCTG TCCAGGCCGA TGACAAGACC
CGCCCGATCC TGACGATTGC CGAGTTGCGC AGGCTGATGC GCGAAGGCCG GCAGTCGCTG
ATCGAGCAGT TCCGCACCAG CAGTGCCAGC CTGCCGGCGG CCAACCGGCT GATCCGGCAA
CTGGCCCGAC ATGTCGACGA CGTGCTGTGC CAGCTGTGGG AGCAGTCGGG CCTGCCCAAG
GGCGCGGCGC TGGTGGCGGT GGGTGGTTAC GGTCGCGCCG AGCTGTTTCC GCATTCGGAC
GTCGACGTCC TGCTGCTGAT GCCGCACGAC CTGCCCGAAA ACGGCGCCGG CGACCGCGAC
GGCCAGGCCC AGCGCGAGCG CGTCGAAGCC TTCATCACCG CCTGCTGGGA CATCGGCCTG
GAGATCGGCT CGAGCGTGCG CACGGTCGAC GAGTGTGTCG GCGAGGCGCT GGCCGACGTC
ACCACCCAGA CCGCGATGCT CGAGAGCCGC TGGCTGTGCG GCTCCAAGCG GCTGTTCGAG
CAGTTTCGCC GGCGCACCTG CGAGGTGCTC GACCCGGCCG ATTTCCTGGT CGCCAAGACG
CTGGAGATGC GCCAGCGCCA CACCAAGTAC GAGGACACGC CCTACGCGCT CGAACCCAAC
TGCAAGGAAA GCCCCGGCGG CCTGCGCGAC CTTCAGGTTG TGCGCTGGGT GGCCGGTGCG
GCGGGGCTGG GCAGCAGCTG GTCCGAGATG GCGAGCAAGG GCCTGATCAC GCGTTTCGAG
GTGCGCCAGC TGCAGCGCAA CGAGGGGCTG CTGAAGGTCA TCCGCGCCCG CCTGCACACG
GTGGCGCAGC GCCGCGAGGA CCGGCTGGTG TTCGACCTGC AGACCGCGGT GGCCGAGAGC
TTCGGCTACA CCTCGACCGC CGAGCGGCGT GCCAGCGAGG CACTGATGCG CCGCTACTAC
TGGGCCGCCA AGGCGGTGAT GCAGCTCAAC CAGATCCTGA TGCTCAACAT CGAGGAGCGC
GTCAACGGCC TGCAGGACGC CGCGATGCGG CCGATCAACG CGCGCTTCTA CGACCGCGGC
GGCATGCTCG AGGTGGCCAG CGACGACCTC TACGAGAAAG ACCCGCACGC CATCCTCGAG
ACCTTCCGGA CCTACCAGCA GACGGTGGGC ATCAAGGGGC TGTCGGTGCG CACGCTGCGC
GCGCTCTACA ACTCGCGCGA GCTGATGGAC GGCGCCTTCC GCGCCGACCC CGAGAACCGG
CGCCTGTTCA TGGCGATCCT GCAAGAGCCG CGCGGCCACA CGCACGCGTT CCGGCAGATG
AACAACACCT CGGTGCTGGG GCGCTACCTG TGGGTGTTCC GGCGCATCGT CGGCCAGATG
CAGCACGACC TGTTCCACGT CTACACGGTC GACCAGCACA TCCTGATGGT GCTGCGCAAC
GTGCGGCGCT TCTTCATCCC CGAGCACACC CACGAGTACC CGTTCTGCTC GCAGCTGGCC
GCGCACTGGG ACCAGCCCTG GCTGCTGTAC GTGGCGGCGC TGTTCCATGA CGTGGCCAAG
GGCCGCGGTG GCGACCACTC CGACCTGGGC GCGGTCGAGG TGCGGCGCTT CTGCCGCGAT
CACGGTGTCG AACGCGAAGA CGCGCGCCTG ATCGAGTTCA TGGTCAAGGA ACACCTGACG
ATGTCGCGGG TGGCGCAGAA GGAGGATCTG TCCGATCCCG AGGTGATCCA GGCCTTCGCC
AAGCTGGTCA AGGATCCGCG CCGCCTGACC GGGCTGTATC TGCTGACGGT GGCCGACATC
CGCGGCACCA GCCCGAAGGT CTGGAACGCC TGGAAGGGCA AGCTGCTCGA GGACCTGTAC
CGCTCGACCC TGCGCGCGCT GGGTGGCGCC CAGCCCAATA CCGATGCCGA GATCGAGCTG
CGCAAGCAGG AGGCGCGGCA GATGCTGGCC CTGCATTCGA CGCTGCCGGG CAGCCAGGAC
GCGCTCTGGC AGACGCTCGA CCTGAACTAC TTCGCCCGCC ACGACAGCGG CGAGATCGCC
TGGCACGCCC GCTCGCTCAA GCGCCTGGCC GACACCGACC GCCCCGTGGT CAGCGCGCGC
CTGTCGCCGG TCGGCGAAGG CCTGCAGGTG ATGGTCTACG CGCCCGACCG GCCCGACCTG
TTCGCGCGCA TCTGCGGCTA TTTCGACAGC GGCCAGTTCA GCATCGTCGA CGCCCGTGTG
CACACCACCC GTGCCGGCTA TGCGCTCGAC ACCTTCCAGG TCATCACGCC GCAGTTCGAG
AACGCCTACC GCGACCTGAT CTCGATGGTC GAGACCCAGC TCGGGCTGGC CCTGAACGAC
GACGGCCCGT TGCCCGAGCC GAGCACCGGC CGGCTGTCAC GTCGCGTCAA GTCGTTCCCG
ATCGCGCCGC GGGTGCAGTT GCGGCCCGAC GAGCGGGCGC AGCGCTGGCT GCTGTCGGTG
TCGGCCAGCG ACCGCTCGGG CCTGCTGTAC CGCATCGCCC GGGTGCTGGC GCAGCACCAC
ATCAACCTGC AGCTGGCCAA GATCAGCACG CTGGGCGAGC GGGTCGAGGA CACCTTCCTG
GTCGACGGTT CCGCCTTGCA GCACAACCGC AGCCAGATCG AGTTCGAGAC TCAGCTGCTC
GACGCGCTGG CCTGA
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| Protein sequence | MPDLHASTLD DVPVQADDKT RPILTIAELR RLMREGRQSL IEQFRTSSAS LPAANRLIRQ
LARHVDDVLC QLWEQSGLPK GAALVAVGGY GRAELFPHSD VDVLLLMPHD LPENGAGDRD
GQAQRERVEA FITACWDIGL EIGSSVRTVD ECVGEALADV TTQTAMLESR WLCGSKRLFE
QFRRRTCEVL DPADFLVAKT LEMRQRHTKY EDTPYALEPN CKESPGGLRD LQVVRWVAGA
AGLGSSWSEM ASKGLITRFE VRQLQRNEGL LKVIRARLHT VAQRREDRLV FDLQTAVAES
FGYTSTAERR ASEALMRRYY WAAKAVMQLN QILMLNIEER VNGLQDAAMR PINARFYDRG
GMLEVASDDL YEKDPHAILE TFRTYQQTVG IKGLSVRTLR ALYNSRELMD GAFRADPENR
RLFMAILQEP RGHTHAFRQM NNTSVLGRYL WVFRRIVGQM QHDLFHVYTV DQHILMVLRN
VRRFFIPEHT HEYPFCSQLA AHWDQPWLLY VAALFHDVAK GRGGDHSDLG AVEVRRFCRD
HGVEREDARL IEFMVKEHLT MSRVAQKEDL SDPEVIQAFA KLVKDPRRLT GLYLLTVADI
RGTSPKVWNA WKGKLLEDLY RSTLRALGGA QPNTDAEIEL RKQEARQMLA LHSTLPGSQD
ALWQTLDLNY FARHDSGEIA WHARSLKRLA DTDRPVVSAR LSPVGEGLQV MVYAPDRPDL
FARICGYFDS GQFSIVDARV HTTRAGYALD TFQVITPQFE NAYRDLISMV ETQLGLALND
DGPLPEPSTG RLSRRVKSFP IAPRVQLRPD ERAQRWLLSV SASDRSGLLY RIARVLAQHH
INLQLAKIST LGERVEDTFL VDGSALQHNR SQIEFETQLL DALA
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