Gene Lcho_1905 details

Gene Information

• Locus tag: Lcho_1905
• ID: 6159805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2061528
• End bp: 2062154
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641664668
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001790937
• Protein GI: 171058588
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.0822251
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGTCA TTGCCGTCAC ACATCCGCTG GTGCGCCACA AGATCGGCCT GCTGCGCGAG 
GCGGCGATCT CCAACAAGCA GTTCCGTGAG CTGACCCATG AACTGGCCTG CCTGCTGACC 
TGCGAGGCCA CCGCCGACCT GCCGATGCAG GCCGCCACCA TCGCGTGCTG GAGCGGGCCG 
GTGCAGATCG AGCAGCTGGC CGGACGCAAG ATCACGGTGA TGCCGATCCT GCGCGCCGGC 
TTGGGCATGC TCGAGGGCGT GCTCGGCCTG ATCCCGACCG CCCAGGTCAG CGTGATCGGC 
CTGGCGCGCA ACCACGCCAC GCTGCAGCCC GAGTGCTACT GCGAAAAGCT CGTCGACCAC 
CTCGACGAGC GCATCGCGTT GATCATCGAC CCGATGCTCG CCACCGCCGG CTCCATGATC 
GCCGCCATCG ACGTGCTGAA GGCACAGGGC TGCACCGATG TGCGAGCCCT GGTGCTGGTG 
GCCGCGCCCG AAGGCATCGC CGCGCTCGAG GCCGCGCACC CTGACGTGCG CTGCTGGGCC 
GCGGCCATCG ACAGCCGGCT CGACGAGGTC GGCTACATCA TCCCCGGCCT GGGCGATGCG 
GGCGACAAGA TCTTCGGCAC CGTCTGA 

 

Protein sequence

MPVIAVTHPL VRHKIGLLRE AAISNKQFRE LTHELACLLT CEATADLPMQ AATIACWSGP 
VQIEQLAGRK ITVMPILRAG LGMLEGVLGL IPTAQVSVIG LARNHATLQP ECYCEKLVDH 
LDERIALIID PMLATAGSMI AAIDVLKAQG CTDVRALVLV AAPEGIAALE AAHPDVRCWA 
AAIDSRLDEV GYIIPGLGDA GDKIFGTV