| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1879 |
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| Symbol | |
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| ID | 6160289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2030813 |
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| End bp | 2031895 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664641 |
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| Product | DNA polymerase III, delta prime subunit |
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| Protein accession | YP_001790911 |
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| Protein GI | 171058562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0526572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCA GCACGCGCCG GGCACCGGCG GCGGCGGCCG AGCGGGCGCC GATCACCACC
GCCGCCGATC TGCCATGGCT GGCCGAGCCG CTGGCGCAGA CGCTCGCCAC GCAGCGCTCG
CACGCCTTGC TGGTGCACGG GCCCACCGGC GTCGGCCAGT TCGAGATGGC GCTGGCGCTG
GCGCGGTCCT GGTTGTGCGA GACGCCGGCC GGCGAGCGGC CTGCCGGTCT GGCCTGCGGC
CGTTGCGGCA GTTGTCACCT GGTCGACGAA CACAGCCATC CCGACCTGCG GCTGCTGGTG
CCCGAGGCGA TGCGCGCGCA GGTCGGCCTG GATGCGGACG ACGCGGCCTC CGACGACGAC
GGCAAGAAGC GCAAGCCGAG CCGCGAGATC AAGGTCGAGC AGATCCGCGC CGCGATCAAC
TTCTCGGAAC TGACCGCCGG GCGTGCGTCG CTCAAGGTGC TGGTGGTCTA TCCGGCCGAG
GCGCTCAACA CGGTGGCCGC CAACGCGCTG CTGAAGACGC TCGAAGAGCC ACCCGGCACG
CTGCGGTTCG TGCTGGCGAG CGCGGCGCCG CAGGCGCTGC CGGCGACCGT GCGCAGCCGC
TGCCAGAGCG TGCCGCTGCG CCCGCCGCCG GCCGATCAGG CACTGGCCTG GCTGGAGTCC
CAGGGTGTCG CGCAGGCCGG CGTGCTGCTG GCGGCGAGCG GCCAGCAGCC GCTGGCGGCG
CTGGCCCATC ACCAGGCCGG GCTCGACGGC GCGAGCTGGC TGGCGCTGCC GACCCGGGTG
GCGGCCGGGG ATGCCGGCGT GTTCGCCAAC TGGCCGCTGC CGCAGGTGGT CGACGTGCTG
CAGAAGCTCT GCCACGACCG CCTGCTGGCC ACGCTGGGCC TGGCGCCGCG CTACTTTCCC
GGTTCGACGG TGCCGCCCGG CGACCTGGCG CGACTGACCG CCTGGGCCGC CGCCCTGCGC
CGTCATGCCC GCAGCGCCGA ACACCCCTGG AGCGCCGGCC TGGCGATCGA GGCCCTGCTG
GTCGAGGCGC ATGCGGCGGA CTTCACGCGG GGCCCGTCGG CGCCGATACA CTCGCGGCCA
TGA
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| Protein sequence | MVSSTRRAPA AAAERAPITT AADLPWLAEP LAQTLATQRS HALLVHGPTG VGQFEMALAL
ARSWLCETPA GERPAGLACG RCGSCHLVDE HSHPDLRLLV PEAMRAQVGL DADDAASDDD
GKKRKPSREI KVEQIRAAIN FSELTAGRAS LKVLVVYPAE ALNTVAANAL LKTLEEPPGT
LRFVLASAAP QALPATVRSR CQSVPLRPPP ADQALAWLES QGVAQAGVLL AASGQQPLAA
LAHHQAGLDG ASWLALPTRV AAGDAGVFAN WPLPQVVDVL QKLCHDRLLA TLGLAPRYFP
GSTVPPGDLA RLTAWAAALR RHARSAEHPW SAGLAIEALL VEAHAADFTR GPSAPIHSRP
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