| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1866 |
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| Symbol | |
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| ID | 6162396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2019392 |
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| End bp | 2020051 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664628 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001790898 |
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| Protein GI | 171058549 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.374926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGC TGCTGCTCGA AGACGATCTG ATCCTGGGCG AGGGCCTGCG CGACTACCTG
CGCACCGAGG GCCATGTGGT CGACTGGTGC AGCCGCCTGG CCCATGCCGA GGCGCTGCGC
GGCGAGCCCT ACGACGCCCT GCTGGTCGAC TGGCAGCTGC CCGACGGCTC GGGCCTGGCC
TGGCTGCGCG GTCGCCGCGC CCACGGCGAC ACCACGCCGG CGCTGATGCT GACCGCGCGC
GACCGGCTCG AAGACCGCGT GATGGGGCTC GACCAGGGCG CCGACGACTA CCTCGTCAAG
CCCTTCGCCC CGGAGGAACT GGCCGCCCGC CTGCGGGCGC TGGCGCGGCG CCTGGCCAGT
GCGGCGGTGC CGCGGCTGAG CTTCGGCGGC GTCGAGATCG ACCTGCAGGC GCGCACCGCC
TGGCGCGACG GCCCGCGCAT CGAGCTGACC GCGCGCGAGT GGATGGTGCT CGAGGCCCTG
GCGCTGCGGG CCGGGCGCAT CGTGCCCAAG CCCGACCTCG AGCGGCTGGT GCTCGGCCAG
GACTCCGAGG TGGTCAGCAA CGTGCTCGAG GTGCACATCT CCAGCCTGCG CCGCAAGCTC
GGCGCGACGC TGATCGAGAC CGTGCGCGGC CTCGGCTACC GCATGGGCCA GCAGGCGTGA
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| Protein sequence | MRLLLLEDDL ILGEGLRDYL RTEGHVVDWC SRLAHAEALR GEPYDALLVD WQLPDGSGLA
WLRGRRAHGD TTPALMLTAR DRLEDRVMGL DQGADDYLVK PFAPEELAAR LRALARRLAS
AAVPRLSFGG VEIDLQARTA WRDGPRIELT AREWMVLEAL ALRAGRIVPK PDLERLVLGQ
DSEVVSNVLE VHISSLRRKL GATLIETVRG LGYRMGQQA
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