| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1825 |
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| Symbol | |
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| ID | 6163932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1973671 |
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| End bp | 1974516 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664587 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790857 |
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| Protein GI | 171058508 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5501] Predicted secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0105482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCC TGTCTCGTCG CGCCGCGCTG GTTGCAACGC TGCTGCTCGC CAGCATCGGC
CCGGCCGCGG CGGCCACGGC GACGCCGACG ATCGCCACCG CCGACCCCTT CGAAGGCGAT
CCCTACCAGT CGCACCCCTG GGTCGACATG CGGCGCGAGT TCCTCGGCGG CGAGCCGGTG
GTGTTCGACC CGCGCGTCAA GGTCAGCGGC CCGGCGTTTG CCGAAGACCC GATGAACGTG
CCGATCTCGG TGTCGGTCGA GGGGCTCGAC CAGATCCAGC GCATCGTCGT GCTGGTCGAC
CGCAACCCGA TCCGCAAGGT GCTCGAGTAC CAGCCGATGG GCGCGCTGCC GCGGGTGGCG
TTCCGTTTCA AGCTCGAACA GGCCAGCCCC GTGCGGGCGG CGGTGCGAAC GGCCGACGGG
CGCTGGCATG TGGGCGGCGC GTGGGTCGAT TCGTCGGGCG GCGGCTGCAC GGCGTCGGGT
GCGACGCGCA AGGACGGCAG CTGGTCGCAG ACGCTGGGCA TCGTCAGCGC GCGGGTGTTC
GACAGCAGCC CGGCGGTCGA CAAGGCCGAG CCCAGCGCAG TCACCCAGGC GCTGGCACCG
ACGCGCGTGC GGCTGCGCGT GATGCACCCG ATGGACACCG GCCTGGTCGG CGGCATCCCG
GCCTTCTACC TCAGCCGGCT GACGCTGCGC GACGGCAACG ACCGCGAGCT GCTGCGGCTG
CAGACCTTCG AGCCGGTGAG CGAGAACCCG GTGTTCTCGT TCGACTTCGC CACCCGCCCG
GCCGGCGTGC TGCGCCTGGT CGGCGTGGAC AACAACGGCA ACCGCATCGA CAGCCGCATC
GAATGA
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| Protein sequence | MTPLSRRAAL VATLLLASIG PAAAATATPT IATADPFEGD PYQSHPWVDM RREFLGGEPV
VFDPRVKVSG PAFAEDPMNV PISVSVEGLD QIQRIVVLVD RNPIRKVLEY QPMGALPRVA
FRFKLEQASP VRAAVRTADG RWHVGGAWVD SSGGGCTASG ATRKDGSWSQ TLGIVSARVF
DSSPAVDKAE PSAVTQALAP TRVRLRVMHP MDTGLVGGIP AFYLSRLTLR DGNDRELLRL
QTFEPVSENP VFSFDFATRP AGVLRLVGVD NNGNRIDSRI E
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