| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1814 |
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| Symbol | |
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| ID | 6161376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1961447 |
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| End bp | 1962166 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664576 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790846 |
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| Protein GI | 171058497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000435855 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGGCG AAGCCCTGAT CAGCCTGGCG CAGGCCGGCG TGGATTTCGG CGCGGTGCGG
GCGCTGCGCG ACGTCACGCT GCAGATCAAC CGCGGCGAGC GGGTCGCGCT GGTGGGCGCC
AACGGCTCGG GCAAGACCAC CTTGCTGCGT CTGCTGCACG GCCTGGTCGC CGGCCACGGC
CGGCGCGAGG TGCATGCCCT CGAGGACACC GACGGCCGCC CGGCGCTGAT GGCGATGCTG
TTCCAGCGGC CCTATCTGCT GCATCTGTCG GCACGCAGCA ACCTGCTGCT GGCGCTCTGG
CTGGCGAAGG TGCCGCGCGC GCAGCGTGGC GAGCGCGCCG CGCAGGCGCT CGAGCGCGTC
GGCCTGCAGG GCGTGGGCGA GCGTGCGGCG CGAGCGCTGT CGGGTGGCCA GCAGCAGCGC
CTGGCGATGG CGCGGGCCTG GGCCATGCGG CCCGACATCC TGTTTCTCGA CGAGCCCACC
GCCAGCCTCG ACCCCAGTGC CAAGCGCGAG GTCGAGTCGC TGATCGATGC CTTCGGCGCC
GACGGCATGA CGCTGGTGAT GAGCACGCAC AACCTCGGCC AGGTCAAGCG CCTGGCGACG
CGGGTGCTGT ACCTCGAGGC CGGCCACGTC GTGGTCGACC TGCCGGTCGA GCGTTTTTTC
CACGACCCGC TGCCGCATGC GGCGGCTCAA TTCCTGAAAG GTGAACTGCC ATGGACCTGA
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| Protein sequence | MSGEALISLA QAGVDFGAVR ALRDVTLQIN RGERVALVGA NGSGKTTLLR LLHGLVAGHG
RREVHALEDT DGRPALMAML FQRPYLLHLS ARSNLLLALW LAKVPRAQRG ERAAQALERV
GLQGVGERAA RALSGGQQQR LAMARAWAMR PDILFLDEPT ASLDPSAKRE VESLIDAFGA
DGMTLVMSTH NLGQVKRLAT RVLYLEAGHV VVDLPVERFF HDPLPHAAAQ FLKGELPWT
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