| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1793 |
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| Symbol | |
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| ID | 6163292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1936979 |
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| End bp | 1937698 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664555 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790825 |
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| Protein GI | 171058476 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000464177 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGCGC TGCACATCGC CTCGCTCACC AAGCGCTACG GCGAGCGGGC TGCGCTGTCG
CAGCTCGGCC TCGACATCGG CGCCGGCCAG CTGGTGGCGC TGCTCGGGCC CAACGGCGCG
GGCAAGTCGA CGCTGTTCCA GGTGCTGACC GGCCTGTTCG TGGCCGACGA GGGCGAGGTC
GAGGTGGCCG GCCACTCGCT GCGCCACTCG GCGGTGGCGG CGCTGCGCCA CATCGGCGTG
GTGTTCCAGC AGATGTCGCT CGACCTCGAC CTGAGCGTCG AGCGCAACCT GCGCTTTCAT
GCCGACCTGC ACGGCCTGCC GCGCGCGCTG GCGCGCGAAC GCATCGTCAG CGGCTGTGCG
GCGCTGGGCA TCGTGGCCGA TCTGGCGCGG CCGGTGCGCG AGCTGTCGGG TGGCAACCGC
CGCAAGGTCG AGCTGGTGCG CGCGCTGCTG CACCGGCCGA AGGTGGTGCT GATGGACGAG
CCCACCGTCG GCCTCGATCC CAAGTCGCGC CGCGACCTGC TGGCCGCCAT CCGCGCCGAC
GTGGCCGAGC GTGGCAGCAG CGTGCTGTGG GCCACCCACC TGGTCGAAGA GGCCGAAGCC
GCCGACCGCG TGGTGGTGCT GCACAAGGGC CGGCTGCTCG CCGACGGCAC GCCGGCGGCG
GTCACCGCGC AGCTGGGCGG CACGAATCTG GAAGATGCCT TCATCCGCGC CACCGCCTGA
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| Protein sequence | MTALHIASLT KRYGERAALS QLGLDIGAGQ LVALLGPNGA GKSTLFQVLT GLFVADEGEV
EVAGHSLRHS AVAALRHIGV VFQQMSLDLD LSVERNLRFH ADLHGLPRAL ARERIVSGCA
ALGIVADLAR PVRELSGGNR RKVELVRALL HRPKVVLMDE PTVGLDPKSR RDLLAAIRAD
VAERGSSVLW ATHLVEEAEA ADRVVVLHKG RLLADGTPAA VTAQLGGTNL EDAFIRATA
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