| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1768 |
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| Symbol | |
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| ID | 6163617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1901697 |
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| End bp | 1903241 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664530 |
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| Product | CheW protein |
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| Protein accession | YP_001790800 |
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| Protein GI | 171058451 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00110635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGTTC TACAGACACC CGCCTCGCCC ACGACCATCG ATGCCGACAC GGTCTACGGC
GTGCTGCAAA TCGGTTCGGC GCAGGTGGCC TTGCCGATCG ATGCGCTGCG CGAGGTGATC
CCCGGCCCGG CCCGGTTCAG CGCCCTGCCC GTCAACACCC CCGGACTGCT GGGCGCCATC
ACGCTGCGTG GCCGGGTGGT GGCGGTGCTG GACCTGCGCC TGCTGCTGGG CCAGCCGGCA
CCCCGTGACA CCGGCCAGGT GGTGGCGCTG GTGCACCACG CGAACGCCGT GATCGGCCTG
CTGGTCGACG GCGTTCGCGG CCTCGCCCGG CTGGCCGCCG GCCGCTTGAA CCGGATGGAC
AGCACGGGCA CCGAGCTGCT GTTTGGCGGC TGCTTCGAGC GCAGCGAAGA CGGCTCGGTG
GTCAGCGTGC TCGATGCCGC TGCGCTGATG CGCCTGCCCG GCGTGCCGCT GCTGCGTGGT
GCGGCGCCCG GCGCGGCCCG CCCGCGCCAG GACCTGGCGT GCCGCTCGCT GATGCTGGTG
CGCTGCGGCG AGATCGGTCT GGCGATCGGC GTGACCGAGG TGCACGCCAC CTTGCCGCAG
GTGACGCTGA TGCCCTCGTC GATCGACGGG CGAATCTGCC ACGGTGTGAT CGAACACGCC
GGCGTGCAGC TGCCGGCGGT CGACCCGCTG GCCTTGCTGG AGCTGGGCGC ACGGCCCGCC
GGCGAGCCGA GCCAGGCGCT GCTGCTGCGC GACGAGAACG GCCTGGTGGC GCTTCTGGTG
AGCCAGGTGA TCGATCTCGT GCAGGTGCCC GAGAGCGACC TGCTAGCGCT GCCGCCCCTG
GCAGTGCGCC GGCCCGAGCT GTTCCGGGCC TTGCTGAACG TGCCGGGCCA TGGCCAGCAC
CTGCTGCTGG GCCCCGGCGT GCTGCGAGAC CATGCCGACC TGCAAGGCCT GGCGCACCTG
AACGTGCGCG CCCAGGTCGG CAACGGAGCC GCCCGCGCGG CCTCGGCGAC GTCGAGCACG
GCCGCCAGCG CCGGCGGCGA CGCGGTCATC ACCTACGACA TCGGCCACGA AGTGGCCACG
CTCCTGTCGC AGGTCAGCGA GGTGCTGCCG CTGCCCACCG AGACAGGGCG CCCGATCAGT
GGCCATCCGG CGGTGACGGG CCTCTTTTCG CACCGTGGCC AGTCGGTCAC TCTGGTCTGC
CTGGCCAGTC TGCTGGGCGG CAGGAACCCG CCCGACCCGG CGACGGCGCG CGTGCTGCTG
GTGCGCCAGG ACGGCGGCAC CTTCGGTTTC ATCGTTCCAC GGCTGTACAA CATCGAGCAC
ACCGTCTGGG AACAGCCCGG CGCCGCGCGT GGCGGTGCAC CCGCAAGCGC CCGCCATCCG
CTGGGCCCTC ACAGCGTGAT CGAGCTGGGC ACCGGCGCGC AACGCCGCAC GCTGCACCGG
GTGGATCTGC ATGCCGTCGC GCGCTCGTTG AGCCGGCCGG ACCCGGGCAC GCCAGCGCGC
GCGCAGCTGC CAGCGTGTGC CCGGCCGCTG ATCCCCGTCG ACTGA
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| Protein sequence | MSVLQTPASP TTIDADTVYG VLQIGSAQVA LPIDALREVI PGPARFSALP VNTPGLLGAI
TLRGRVVAVL DLRLLLGQPA PRDTGQVVAL VHHANAVIGL LVDGVRGLAR LAAGRLNRMD
STGTELLFGG CFERSEDGSV VSVLDAAALM RLPGVPLLRG AAPGAARPRQ DLACRSLMLV
RCGEIGLAIG VTEVHATLPQ VTLMPSSIDG RICHGVIEHA GVQLPAVDPL ALLELGARPA
GEPSQALLLR DENGLVALLV SQVIDLVQVP ESDLLALPPL AVRRPELFRA LLNVPGHGQH
LLLGPGVLRD HADLQGLAHL NVRAQVGNGA ARAASATSST AASAGGDAVI TYDIGHEVAT
LLSQVSEVLP LPTETGRPIS GHPAVTGLFS HRGQSVTLVC LASLLGGRNP PDPATARVLL
VRQDGGTFGF IVPRLYNIEH TVWEQPGAAR GGAPASARHP LGPHSVIELG TGAQRRTLHR
VDLHAVARSL SRPDPGTPAR AQLPACARPL IPVD
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