Gene Lcho_1686 details

Gene Information

• Locus tag: Lcho_1686
• ID: 6162481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1798978
• End bp: 1799727
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641664441
• Product: sporulation domain-containing protein
• Protein accession: YP_001790718
• Protein GI: 171058369

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGTGCCC GTCGTCGACT GATCGGCGCG GCCGTGCTCG TGGTGCTGGC CGTGATCGCC 
TTGCCGATGG TGTTCGAATC GCAGCCGCGA CCGCTCGACA CCTCGATCGC GATCGTGCTG 
CCGCACAAGG ATGCCGTCCA GGCGCCTGCA CCCGTCGCGG CGCCGGCGCC GATCCCGGTG 
CCGCCTCCCC CGCCTGTGCC GACGCTGCCC GATGCCCCGG CGCAGCCGCT GCCACAGGCC 
GCGCCCCCGT CGTCGACCGC TGCGATCGAG GCAAGTCCGC CACGCCAGCC GGCCGTGACC 
GCACCGGCGC CGGCGGCCAA GCCGGTGATG GACAACGCTG CAGCGGAAAA GGCTGCAAGA 
GAACGAGCGG CCCGCGCCGA TCGCCTGGCC GCCGAGAAAG CCGCAGAGAA GGCCGCGGAG 
CGAGCTGCGG AACGGGCTGC CGCCGAGCGT GCGGCGGCCG CTGCGGCTGC CAAGGCGGCC 
GCCGACAAGG CTCAAGCCGC CGCCGCGAAG GCCGAATCCG GCACGCGGTT CATGGTTCAG 
GTCGGCGCAT TCGCCGAGGC GGCGACCGTG CGCGAGGCTC GCCAGCGCAT CGAGAAGCTC 
GGCCTTCGAG CCACCGAGCA GGACGTCGAG ACGGCCGGTG GCCGTCGCAC CCGCGTGCGG 
CTGGGGCCGT TCAATTCGCG CGAAGAGGCC GATCGTGCGC TCGCGAAGTT GCGTGCAGCA 
GGCCTGCCCG GCGCCGTCGT GCCGCTTTGA 

 

Protein sequence

MRARRRLIGA AVLVVLAVIA LPMVFESQPR PLDTSIAIVL PHKDAVQAPA PVAAPAPIPV 
PPPPPVPTLP DAPAQPLPQA APPSSTAAIE ASPPRQPAVT APAPAAKPVM DNAAAEKAAR 
ERAARADRLA AEKAAEKAAE RAAERAAAER AAAAAAAKAA ADKAQAAAAK AESGTRFMVQ 
VGAFAEAATV REARQRIEKL GLRATEQDVE TAGGRRTRVR LGPFNSREEA DRALAKLRAA 
GLPGAVVPL