| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1651 |
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| Symbol | |
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| ID | 6161511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1760323 |
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| End bp | 1761243 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664405 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001790683 |
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| Protein GI | 171058334 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCCG GCGTGTCGGT CGCACCGCTC GTCGAGCCGA CCGCCGACGG CTGGCGCGTC
GCCTTCGCGG CGATGGCCAG CCCCTGCGAA CTGCTGCTGC AAGGCGGCGA CGCGGCCCTG
GCGCGCCGGC TCGGCGAGAT CGCGCACGGT GAGGCGCAGC GCATCGAGCA CAAGTTCAGC
CGCTACCGCG ACGACAGCGT GCTGGCGCGC CTGCATGCGA GCGCCGGCGA GGCGGTCGAG
GTCGATGCCG AAACCGCCGA CCTGCTCGAC TTTGCCGCCC ATTGCCACGC GCTCAGCGGC
GGGCTGTTCG ACATCACCAG CGGCGTGTTG CGGGCGGCCT GGCGCTTCGA CGGCTCCGAC
CGCCTGCCCG ACCCGGCGCA GGTGACGGCC TTGCTCGGGC AGGTCGGCTG GCCGCGCCTC
CAGTGGCAGC GGCCGTGGCT GACGCTGGCG CCGGGCATGC AGATCGACCT GGGCGGCATC
GGCAAGGAAT ACGCGGTCGA CCGCACGCTC GGCCTGCTGC GTGCGCAGAC CGGGCTGCCG
GTGCTGGTGA ACTTCGGCGG CGACCTGATC GTCAGCGGGC CGCGCCTGGA TGCGGCCGGC
CAGCCGCGAC CCTGGCAGGT CGGCATCGAG CCACCGGATC GGCCGTCGGC GTCACGCGTG
CCGGCGATCG TGCTGCTGCA CGGCGGCGCG CTGGCCACCA GCGGCGACGC CCGCCGCTTT
CTGCTCAAGG ACGGCGTGCG CTACGGCCAC GTGCTCGATC CGCGCACCGG CTGGCCGGTG
CCGGGCACGC CGCGTTCGGT CACGGTGGCG GCGCCGACCT GCACCGAGGC CGGCCTGCTC
AGCACGCTGG CGCTGCTGCA GGGCGCGCAG GCCGAGGCGT TCCTGCAGGC GCAGGGCGTG
CCGCACTGGG TGTTGAACTG A
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| Protein sequence | MPSGVSVAPL VEPTADGWRV AFAAMASPCE LLLQGGDAAL ARRLGEIAHG EAQRIEHKFS
RYRDDSVLAR LHASAGEAVE VDAETADLLD FAAHCHALSG GLFDITSGVL RAAWRFDGSD
RLPDPAQVTA LLGQVGWPRL QWQRPWLTLA PGMQIDLGGI GKEYAVDRTL GLLRAQTGLP
VLVNFGGDLI VSGPRLDAAG QPRPWQVGIE PPDRPSASRV PAIVLLHGGA LATSGDARRF
LLKDGVRYGH VLDPRTGWPV PGTPRSVTVA APTCTEAGLL STLALLQGAQ AEAFLQAQGV
PHWVLN
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