Gene Lcho_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1650 
Symbol 
ID6161510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1759677 
End bp1760312 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content75% 
IMG OID641664404 
Producthypothetical protein 
Protein accessionYP_001790682 
Protein GI171058333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.734617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA ATCCTGTTCG TCCGACTGCC CCGAAGCGGC GTTTCGGTGG GCTGGTCGGC 
CTGCTGCTGA TCGGCGGTGC CGGCGCTGCG GTGGCGCAGT ACAAGGTGGT GGCGCCGGAC 
GGATCGGTCA CCTACACCGA CCGCGTCCCG GCTGCGGCCA GCAGCCGCAC CCAGCCCTTG 
CGTGCGGGCG CCGGCGGCGC CGACGGCGCG GCCGAGCTGC CGTTCGTGCT GCGCCAGGTG 
ATGGCGCGGT ATCCGGTCAC GCTCTACACC GCGCCGGCCT GCGCGCCGTG CGACACCGCC 
CGCCAGCTGC TGCGCCAGCG CGGCGTGCCG CTGGTCGAAC GCAGCGTACC CACGCCCGAC 
GATGTCGGCG AGCTGCGCCG CATCGAGCAG ACCACCGACC TGCCGATCCT GCGGCTGGGC 
TCGCAGCGCC TGGTCGGCTA CAGCGCCGAC GAGTGGACGG CGATGCTCGA TGCGGCCGGC 
TACCCGCGCC AGTCGATGCT GCCGGGCAGC TATCGCCAGC CGGCGGCCCG GCCGCTGATC 
GCGCCGCGCA CGGCCCAGCC CGCGGCGATC GAGGCGCCGC GGCCCGCCAA CGCGCCGGAG 
CCGACGGCCG CAGGTGCCGG TGGCATCCGT TTCTGA
 
Protein sequence
MAANPVRPTA PKRRFGGLVG LLLIGGAGAA VAQYKVVAPD GSVTYTDRVP AAASSRTQPL 
RAGAGGADGA AELPFVLRQV MARYPVTLYT APACAPCDTA RQLLRQRGVP LVERSVPTPD 
DVGELRRIEQ TTDLPILRLG SQRLVGYSAD EWTAMLDAAG YPRQSMLPGS YRQPAARPLI 
APRTAQPAAI EAPRPANAPE PTAAGAGGIR F