| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1649 |
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| Symbol | |
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| ID | 6161509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1758557 |
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| End bp | 1759558 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664403 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001790681 |
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| Protein GI | 171058332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.658515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CCGACTTCAT CCAGCCGCTC GACCACGGCA TCACGGTGAT CGACACCGGT
TTCCACCGCC CGAACTTCGA CGCCGCCTAC CTGCTGATCA GCGACGGCCG CGCCGCCTTC
ATCGACACCG GCCACAACGC CGGCGTGCCA CGCCTGCTGG CCGCACTCGC GTTCCACGGC
CTGGGGGTTG AGGCGGTCGA CTGGGTCATC CCGACCCACG TGCACCTCGA CCACGCCGGC
GGCGCCGGCC TGCTGATGCA GCAGCTGCCG AACGCCCGCG CGCTGATCCA CCCGCGCGGC
GCCCGCCACC TGATCAACCC GGTCGCGCTG ATCAAGGGCG CGCAGGCGGT CTACGGCGCC
GAGGAAGTGG CGCGCACCTA CGGCGAGATC CAGCCGATCC CGGCCGAACG CGTGCTCGAG
AGCCACGACG AGATGACGGT GCAGCTCGGC AGCCGCCCGC TGCGCCTGAT CGACAGCCCC
GGCCACGCCC GCCACCACCA CTGCATCTGG GACGCCACCA GCCGCGGCTG GTTCACCGGC
GACACCTTCG GCATCAGCTA CCGCGAGTTC GACGGCCCGC AGGGCCCGGA CAGCGCCTAC
ATCCTGCCCA GCAGCACGCC GGTGCAGTTC GACCCGCAGG CGATGCGCGC GTCGATCGAG
CGCATGCTGC AGACCGAGCC GCAGTGGATC TACCCGACCC ACTACGGCCG GCTCGGCAAC
GTACCCGACC TGGCGGCGCA GCTGTTCGAC CAGCTCGAAG TGCTGGAGCA CTACGCGCTG
GCCTGGGCCC GCGCCAACCC CGGCGCCACC GATGCGCAAC GCGAGGCCGC CATGATCGAG
CTGATGCGCA ACATCCTGCT CACCGCTGCC AATCGGGCCG GATCGATGCT GCCGCTGCTG
CTGGCCGAGG CCCTGCTGGA AACCGACATC AGGCTCAACG GCCAGGGCCT GGCGATCTGG
CTGGCCAGCC AGCCCACGGC AGACACGCCA GCCGTGCCAT GA
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| Protein sequence | MSAPDFIQPL DHGITVIDTG FHRPNFDAAY LLISDGRAAF IDTGHNAGVP RLLAALAFHG
LGVEAVDWVI PTHVHLDHAG GAGLLMQQLP NARALIHPRG ARHLINPVAL IKGAQAVYGA
EEVARTYGEI QPIPAERVLE SHDEMTVQLG SRPLRLIDSP GHARHHHCIW DATSRGWFTG
DTFGISYREF DGPQGPDSAY ILPSSTPVQF DPQAMRASIE RMLQTEPQWI YPTHYGRLGN
VPDLAAQLFD QLEVLEHYAL AWARANPGAT DAQREAAMIE LMRNILLTAA NRAGSMLPLL
LAEALLETDI RLNGQGLAIW LASQPTADTP AVP
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