| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1607 |
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| Symbol | tatB |
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| ID | 6160430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1707108 |
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| End bp | 1707596 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664361 |
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| Product | sec-independent translocase |
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| Protein accession | YP_001790639 |
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| Protein GI | 171058290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00172406 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTCGACA TCGGTGTCAC CAAGCTGCTC ATCATCGGCG GCATCGCCCT GGTCGTGATC
GGCCCGGAAC GCCTGCCGCG CATCGCCCGC ATGGCCGGCA CCTTCCTTGG CCGGGCCCAG
CGTTACGTGG CCGACGTCAA GGCCGAGGTC AGCCGCTCCA TCGAGCTCGA GGAGCTCAAC
AAGATGAAGC AGGAGTTCGA CAGCGCCGCG CGCGATGTCG GGCAGACCGT CAGCAGCGGT
CTTGAAGAAG CCACCTCCGA CATCAACAGT GCCCTGCAGC TCGAAGAGCC GCCCAACCCC
TACGACGTCG ATGATCCGGT CGGCTGGATC AACCCCGGCC CCTCGTACGT GCATCCGCAG
AAGAAGTGGC GCGTCAAGCG GGGCGCCACG CCGCAGTGGT ACAAGCAGCG CGAAGGCGTG
CGTCGCCATG TGCAGTCGGC CGCCGCCCGG GTGGCCCGAC ATCGCCCACG CACCTCGAAA
TCCTACTGA
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| Protein sequence | MLDIGVTKLL IIGGIALVVI GPERLPRIAR MAGTFLGRAQ RYVADVKAEV SRSIELEELN
KMKQEFDSAA RDVGQTVSSG LEEATSDINS ALQLEEPPNP YDVDDPVGWI NPGPSYVHPQ
KKWRVKRGAT PQWYKQREGV RRHVQSAAAR VARHRPRTSK SY
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