| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1594 |
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| Symbol | |
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| ID | 6163001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1691545 |
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| End bp | 1692093 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641664348 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790626 |
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| Protein GI | 171058277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00164721 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTCA AGACTTTGGG CGCAGCTGCG CTGCTGGCCT GCTTCGGCAC GCTCGGAACG
GCACAGGCCG CGAGTTACAC CGGCGATTAC GTACTGAGTT TCGGCGGTAC GACCTTTGCA
CAGTTCAGCA TCACCACCGA CGGATTGGCG AACGCCGACG GCTTTGAAAC CATCACCGAC
CTCTGGGGAA CCGTGGGCGG CACCTCGATC ACGGGCCTCC TGGCACCCGG CAATACCGGC
GGCAACGACA ATCTGTTCCG CCTCGACGGC ACGCATCTGA CATTCGGCGG TGTGTCGTTC
ATCGCGGGCA GCGATGGCGT GTCGCTCGAC GCGCTGAACT GGAATCTCTT CTACAGCAGC
AACAGCAGGT CGTATGTCCT GAGTGCCGAA GACTCGTCGT TCTTCAGCCG CGGCCAGTTG
AGCGTCAGTC CGGTCAGCCC GGTGCCGGAA CCCGAGAGCT ACGCCATGTT GCTGGCCGGC
CTGGGCGCAC TGGGTTTCGT GAGCATGCGT CGACAGTCAC AGCGACAGGT TCACGACGAC
GCGATCTGA
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| Protein sequence | MNLKTLGAAA LLACFGTLGT AQAASYTGDY VLSFGGTTFA QFSITTDGLA NADGFETITD
LWGTVGGTSI TGLLAPGNTG GNDNLFRLDG THLTFGGVSF IAGSDGVSLD ALNWNLFYSS
NSRSYVLSAE DSSFFSRGQL SVSPVSPVPE PESYAMLLAG LGALGFVSMR RQSQRQVHDD
AI
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