| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1575 |
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| Symbol | |
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| ID | 6163274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1673334 |
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| End bp | 1675667 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664329 |
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| Product | histidine kinase |
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| Protein accession | YP_001790607 |
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| Protein GI | 171058258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.179984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC ACCGCCTACC CCTGCCCGCC CCGTTCGACT GGCCGCGACA CCTGCTCAGG
TGCGCGGCTT TTTTCATCGG CCTGATGGGC CTGCTGCTGG GCTCGGCGGC GGTCGCCAAC
CCGCCGCTGG CGCTGACACA GGCGCACTTC AGCCCGCGCC CCGGCGCGCC CGAGCAGGCC
GTCGAACTGC CCGACACCTG GGCCCAGCGC GGCCTGCCCA ACCGTGGCGC GGGCATCTAC
CGCATCGTCT TCGAGCTGCC GGTGGTGCCG CAGCAAGTGT GGGCGCTGCG CATCGACCGC
CTGGCCGACC AGCACGAGAT CCGCCTCAAC GGCGCGCTGC TGAGCGGGCG CATCGACCCC
GAGGCCGGCA AGCCGCCGCT CAGCCGCGCC ACGCCGACCT GGATCCCGGT GGCGCCGCAG
ATGCTGCGCA GTGGCCATAA CGAGTTGCAG ATCTCGGTGC GCTACAGCAC CCGCGCGGGG
CTGTCGCCGG TGTGGATCGG ACCAGCCGGC CCGCTGTGGG ACGACAGCCT GCTCGAACAG
CGCCTCGAGT TCCTGCTGCC GGTGATGCTC AACTGCGGCG GCAGCGCGCT GGGCCTGTTC
ATGGTGCTGC TGTGGTGGCG CCGGCGCAGC GAGGTGCTGA TCGGCACCTT CGGCCTGGTG
TGGCTGCTGA TCTCGCTGCG CAGCACCGCC TACTTCACGA TCTATTCGGC CCAGCAGGGC
ATCGTCTTCG ATGCCTTCAT GTACATCAGC CAGATCCTCA GCGCGCTGCT GCTGGGCATG
GCCTCGCTGA TCCTGGCCGA TCGGGCCCGG CACTGGTGGC GCCGCCTGCT GATCGGCCTG
GCCGTGCCGC TGATGCTGCT GGGCATCCCG GCCGCGGCGC TGGGCGAGGT CGACACCCTG
CGCACCTTCA CCTACCCGCT GGTGCTGGGC GCGGTGATCC CGCCGCTGGT GATGGTGGCG
ATCAGCGCGC GGCGGCTGCA GTCGCGCGCC CGGCTGCTGA TGCTGACCGC CCTGCTGACG
CTGGTGGTGA CCGCCGCGCA CGACTACCTC GGCTGGCGCG GCGAGCTGTC GGTGATGTCG
CGCTACTGGA TGCCGCTGAT GCTGCCGCTG GTGTTCTCGG TGTTCGCCTG GACGCTGATG
CAGCGCATGG TCAACGCGCT CGAACAGGTC GAGCAGCTCA ACTCCGACCT CGAGTTGCGG
GTCGCCGAGC GCACCCGCGC GCTCGAGCAG GCCAACCTCA CCAAGACCCG TTTCCTGGCC
GCCGCCAGCC ACGACCTGCG CCAGCCGGTG GTCGCCATCG GCATCCTGAT CGACCTGCTG
CGCGAGCACA TCCAGGTGCC CGCGCAGCGC CGCATGATCG ACCGCGTCAA CGATGCGGTG
GCCTCGATGG AGGCGCTGCT CAAGGGCCTG CTCGACCTGT CGCGGCTGGA GGCCGGCACG
GTGCAGCCGC GCTTCGAATC GATCGAGCTG CAGACGCTGT TCGACGCCAT CGCCGCCCAC
GTCAACGAAG CCGCGCACCA GAAGGGCCTG AAGCTGCGCC TGCGCCCGAC CCGGCTGGCG
GTGCGCAGCG ACCGCGTGCT GCTCGAGCAG ATCGTGCGCA ACCTGGTCAG CAACGCGGTG
CGCTACACCG AACGCGGCGG CGTGCTGGTG GCCGCACGGC AGCGCGGCGA CCGCGTCGTG
CTGCAGGTCT GGGACAGCGG CCACGGCATC GCCGCCGACC AGCAGGAGCG CATCTTCGAC
GAGTTCGTGC AAGGCGCCGG CCGGCGCAAC GCCGAGGGCA ATCTCGGCCT CGGCCTGGGG
CTGGCGATCG TGCGGCGGGC GGTGCAGCTG CTCGGCCACC GGCTGAGCCT GCGCTCGCAG
CCCGGCCGCG GCTCCTGCTT TGCCCTCGGC ATGGATGCCG CGCAGGCCCG GCCCGGCGCG
TTGCGGGCCG CCCCGTCGGC GGCCCGGCCG CTGCAGGACT GGCGCCTGGC GCTGGTCGAC
GACGACGACC AGGTGCGCGC CGCGCTGGCC GCGCGGCTGG CGGCCTGGGG CGCCGAGGTC
GAGAGCCACG CCAGCCTGAC CGGTTTCCGG CAGTGGCTGG CACGCCATCC GCGCGGACGC
AGCGGCGTCG ATTTCCTGAT CACCGACCAG CGCCTGATCG GCGCCACCGG GCTCGAGGTG
ATCGAAGCGC TGCACAGCTA TGCCGGCCCG GTGCCGGCGC TGGTGATCAC CGGCGACACC
GCGCCGGCCG ATCTGGCCCT GCTCGCCAAC AGCGGGGTGA CGGTGCTGCA CAAGCCCTTC
CGCGCCGAAG TCCTGCTGGC GGCCATCATG CAGGTGCGCC GCGCCGCGCC CTGA
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| Protein sequence | MIAHRLPLPA PFDWPRHLLR CAAFFIGLMG LLLGSAAVAN PPLALTQAHF SPRPGAPEQA
VELPDTWAQR GLPNRGAGIY RIVFELPVVP QQVWALRIDR LADQHEIRLN GALLSGRIDP
EAGKPPLSRA TPTWIPVAPQ MLRSGHNELQ ISVRYSTRAG LSPVWIGPAG PLWDDSLLEQ
RLEFLLPVML NCGGSALGLF MVLLWWRRRS EVLIGTFGLV WLLISLRSTA YFTIYSAQQG
IVFDAFMYIS QILSALLLGM ASLILADRAR HWWRRLLIGL AVPLMLLGIP AAALGEVDTL
RTFTYPLVLG AVIPPLVMVA ISARRLQSRA RLLMLTALLT LVVTAAHDYL GWRGELSVMS
RYWMPLMLPL VFSVFAWTLM QRMVNALEQV EQLNSDLELR VAERTRALEQ ANLTKTRFLA
AASHDLRQPV VAIGILIDLL REHIQVPAQR RMIDRVNDAV ASMEALLKGL LDLSRLEAGT
VQPRFESIEL QTLFDAIAAH VNEAAHQKGL KLRLRPTRLA VRSDRVLLEQ IVRNLVSNAV
RYTERGGVLV AARQRGDRVV LQVWDSGHGI AADQQERIFD EFVQGAGRRN AEGNLGLGLG
LAIVRRAVQL LGHRLSLRSQ PGRGSCFALG MDAAQARPGA LRAAPSAARP LQDWRLALVD
DDDQVRAALA ARLAAWGAEV ESHASLTGFR QWLARHPRGR SGVDFLITDQ RLIGATGLEV
IEALHSYAGP VPALVITGDT APADLALLAN SGVTVLHKPF RAEVLLAAIM QVRRAAP
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