| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1514 |
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| Symbol | |
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| ID | 6163340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1599961 |
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| End bp | 1601442 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664269 |
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| Product | NADH dehydrogenase subunit N |
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| Protein accession | YP_001790547 |
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| Protein GI | 171058198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0500388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCA TGAATTGGCT CGCGGTCTAT CCCGAGATCT TCCTGTTGGT GATGGCTTGC
GTGGTTGCGC TGGCCGACCT GTTTGTCACC GATCCCCGCC GCACACCCAC CTACGTGCTG
ACGCTGGTGA CGCTGGCCGC TTTTGCAGCC ATGCACCTGG CGCTGTTCAA CGGTGGCGAG
ACGCTCTACG CGGCCGGCCG CATGGTCGTC ACCGACCCGA TGGGTCACCT GCTCGCGTTC
TTCTCGACCG TGGCCGTCGC GGTCACGCTG GTCTATGCCC AGCCGTATGC GGCGAGCCGC
GAGATGCTCA AGGGCGAGCT GTTCACGCTC AGCCTGTTCT CGCTGCTGGG CATCTCGATC
ATGGTGTCGG GCAACAACTT CCTGGTCATC TATCTCGGCC TGGAGCTGAT GAGCCTGTCG
CTGTACGCGC TGGTGGCGCT GCGGCGCGAC CACGCCCAGT CGACCGAGGC GGCGATGAAG
TACTTCGTGC TCGGCGCGCT GGCCTCGGGT TTCCTGCTCT ACGGCATGTC GATGATGTAC
GGCGCCACCG GCAGCCTCGA CCTCGGCCGC GTGTTCGAGG CCATCGGCAA GGGTGAAGCC
AACCACCAGG TGCTGGTGTT CGGCGTGGTG TTCATCGTCT CCGGCCTGGC GTTCAAGCTC
GGCGCGGTGC CGTTCCACAT GTGGGTGCCC GACGTCTACC ACGGCGCTCC GACGGCGGCC
ACGCTGCTGA TCGCCGGTGC GCCCAAGATC GCGGCCTTCG GCATGACGAT GCGCCTGCTG
GTCGACGGCC TGCTCGGCCT GGCGGTCGAC TGGCAGCAGA TGCTCGTGGT GCTGTCGGTC
TGCTCGCTGG TGGTCGGCAA CCTGGCCGCC ATCGCGCAGA GCAACCTCAA GCGCATGCTG
GCCTACTCGA CCATCGCGCA GATGGGCTTC CTGCTGCTCG GCCTGGTCTC CGGCGTGGTC
AACGGCAACA CGCTGTCGGC GGCCAATGCC TACAGCTCGG CGATGTTCTA CATCATCACC
TACGTGGTGA CGACGCTGGG CACCTTCGGA CTGATCATGC TGATGGCGCG CCAGGGCTTC
GAGGCTGACC AGATCACCGA TCTGGCCGGG CTCAACCAGC GCAACCCGCT GCTGGCCGGC
GTGATGGCGG TGTTCATGTT CTCGCTCGCC GGCATCCCGC CGACGGTCGG CTTCTACGCC
AAGCTGGCGG TGCTGCAGGC GCTGGTCTCG ACCAACGACA CCGGCTATCT GGTGCTGGCG
ATCTTCGCGG TGGTGATGTC GCTGGTCGGC GCCTTCTACT ACCTGCGCAT CGTCAAGGTC
ATGTACTTCG ACGAACCCGT CGACAACTCG CCGATCCACG CCCCGGCGCA TGCCCGTGCG
GTGCTGTCGC TCAACGGCGC GGCCGTGCTG GTGCTCGGCA TCCTGCCGGG TGGCCTGATG
GCGATGTGCG CGCAAGCCAT CGTCAAGGCG CTGGCGAGCT GA
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| Protein sequence | MTSMNWLAVY PEIFLLVMAC VVALADLFVT DPRRTPTYVL TLVTLAAFAA MHLALFNGGE
TLYAAGRMVV TDPMGHLLAF FSTVAVAVTL VYAQPYAASR EMLKGELFTL SLFSLLGISI
MVSGNNFLVI YLGLELMSLS LYALVALRRD HAQSTEAAMK YFVLGALASG FLLYGMSMMY
GATGSLDLGR VFEAIGKGEA NHQVLVFGVV FIVSGLAFKL GAVPFHMWVP DVYHGAPTAA
TLLIAGAPKI AAFGMTMRLL VDGLLGLAVD WQQMLVVLSV CSLVVGNLAA IAQSNLKRML
AYSTIAQMGF LLLGLVSGVV NGNTLSAANA YSSAMFYIIT YVVTTLGTFG LIMLMARQGF
EADQITDLAG LNQRNPLLAG VMAVFMFSLA GIPPTVGFYA KLAVLQALVS TNDTGYLVLA
IFAVVMSLVG AFYYLRIVKV MYFDEPVDNS PIHAPAHARA VLSLNGAAVL VLGILPGGLM
AMCAQAIVKA LAS
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