Gene Lcho_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1486 
Symbol 
ID6162224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1571714 
End bp1572031 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content69% 
IMG OID641664240 
Producthypothetical protein 
Protein accessionYP_001790519 
Protein GI171058170 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0634808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG AACTGATCGC CGCCCTGGAA GCCCGCATCC GCGAGGCGCT GCACAGCGTG 
CAGGACCCGG AGATGGGCGA GAACATCGTC GACCTCGGCC TGCTCGAGGG CATCCTCATC
GACGACCAAG GCGTGCAGGT GACGCTGATC CCGACCAGCG CCACCTGCCC GATGGCCGAC
GTGATCCTCG ACGACGCACA GGCGGCGGTC GAGGCGGTCT GCCCGGCCGG CACCAGCGTC
GAGATCGACA TGGACTGGGA GCAGGTCTGG AGCCCGGATC GGCTGGCGCC GGCCTTGCGC
GAGCGCTTCG GGTGGTGA
 
Protein sequence
MEPELIAALE ARIREALHSV QDPEMGENIV DLGLLEGILI DDQGVQVTLI PTSATCPMAD 
VILDDAQAAV EAVCPAGTSV EIDMDWEQVW SPDRLAPALR ERFGW