Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1481 |
Symbol | |
ID | 6162016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1563076 |
End bp | 1564278 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664235 |
Product | periplasmic copper-binding |
Protein accession | YP_001790514 |
Protein GI | 171058165 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.194727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCCCG GCGACGCCCT GCAGCCGGTG ATCGACCGCG CCGCCGCCGG CGACGTGATC GAGCTGCAGC GCGGCCTCTA CACCGCCAAC CTGCTGATCG CCAAGCCGCT GACGCTGCGT GGCATCGGCA AGCCGACGAT CAGCGGCGGC CTGCAGGGCG ACACGATCCG CGTCACCGCC ACCGACGTCA CCATCGAGGG CCTGATCGTG CGCGACTCGG GCGACAGCCT GAAGGACCAG AACGCCGGCA TCTACATCCG CCCGGGCGCA CACCGCGCCG TGATCCGCCA CAACGACCTG GCCTACAACC TGTTCGGTCT GTGGATCGAG AAGGCCGACG ACGTGCGGGT GGAGCACAAC CTGATCACCG GCAAGCGCGA GTACGGCAGC TCGCAGCGTG GCAACGGCGT GCAGCTCTAC AACACCCAGG GCGCGCGCAT CATCGGCAAC CACATCAGCT TCGTGCGTGA TGCGCTCTAC GTGGACGTCT CGCACGACGC GATCTTCCGG GGCAACCGGC TGCACCACAG CCGCTACGGC ACCCACTACA TGAACTCGTA TCGCAACCTC TGGGAAGACA ACGACACGTA CGCCAACCGC GGCGGCCTGG CGTTGATGGA GGTGCGCGAC CAGGTGGTGC GCAACAACCG CGCCTGGGGC AACACCGACC ACGGCATCAT GCTGCGCACG CTGCAGGACT CGGTGATCGA GAACAACGTG GTGATGGGCA ACGCACGCGG CTTCTTCATC TACGACGTCG AATACGCCAC GCTGCGCGGC AACCTGGTGC TCGACAACGA CGTCGGCGTG CACCTGTCGG CCGGCTCGAC GCGCAACCGC GTCGACGGCA ACGACTTCAT CGGCAACCGC GAGCAGGTCA AGTACGTCGG CTCGCGCGAC GAACGCTGGG GCGGCGAACA CGGCAACCAC TGGGGCAACT ACCTCGGCTG GGACCGCAAC GGCGACGCAC GCGGCGACGT GCCCTACGAG GCCAACGACA TGGTCGACCG TCTGAGCTGG CAGCACCCGA TGATGAAGCT GCTGCTCGCC AGCCCGGCCG TTCAGGCGCT GCGCCTGGTC GGCCAGCAGT TCCCGGTGCT GCGCGTTCCC AGCGTGATCG AAGCCCGCCC GCGCATGCAG CCGGTGCAGC CGCAATGGCC GGCCTGGCGT CAGAAATTGA AGGATCACCC CGATGCGCGC TGA
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Protein sequence | MRPGDALQPV IDRAAAGDVI ELQRGLYTAN LLIAKPLTLR GIGKPTISGG LQGDTIRVTA TDVTIEGLIV RDSGDSLKDQ NAGIYIRPGA HRAVIRHNDL AYNLFGLWIE KADDVRVEHN LITGKREYGS SQRGNGVQLY NTQGARIIGN HISFVRDALY VDVSHDAIFR GNRLHHSRYG THYMNSYRNL WEDNDTYANR GGLALMEVRD QVVRNNRAWG NTDHGIMLRT LQDSVIENNV VMGNARGFFI YDVEYATLRG NLVLDNDVGV HLSAGSTRNR VDGNDFIGNR EQVKYVGSRD ERWGGEHGNH WGNYLGWDRN GDARGDVPYE ANDMVDRLSW QHPMMKLLLA SPAVQALRLV GQQFPVLRVP SVIEARPRMQ PVQPQWPAWR QKLKDHPDAR
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