| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1479 |
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| Symbol | |
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| ID | 6162014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1561255 |
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| End bp | 1562070 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664233 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001790512 |
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| Protein GI | 171058163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.180659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCC GCCAGATCCT GACCCTCGCG GCCAAGGAGT TCCGCGACCG CCTGCGCAAC
CGCTGGGTGC TCGCGGTGGC GCTGGTGTTC GCGGTGTTCT CGCTCGTGAT CGCCTATGCC
GGCGGCGCGC AGCAGGGCAC GGTGGGCCTG CGCTCGATCG AGTTCACCAT CGCCAGCCTC
GTCAGCCTGG TGATCTACCT GGTGCCGCTG ATCGCGCTGC TGCTGGGCTT CGACGCCATC
GTCGGCGAGC GCGAGCGCGG CTCGCTCGAC CTGCTGCTGG CGCTGCCGAT CACGCGCGGC
GAGCTGCTGC TGGGCAAGTA CCTCGGCCTG GCCGCGGCGC TCGCGCTGGC GATGCTGGCC
GGCCTGGCGC TGGTGGGCGG CGTGCTGGGC TGGCAGTTCG GCGCCAACGG CTTGTTCCAC
TACGCCGGCT TCGTGTTGAG CACGCTGCTG ATGGGCCTGG CCTTCCTGAG CCTGGCGGTG
CTGCTGTCGG TGCTGGCGCG TGACCGCACG CGCGCCTCCG GCCTGGCGAT CGCGCTGTGG
TTCTTCTTCG TGCTGGTGTT CGACCTGCTG CTGCTGGGCG CGCTGGTGGC CAGCGGCGGC
CAGTACGGCG GCGCGGCCTT CCCCTACCTG CTGCTGCTCA ATCCGGCGGA CGTGTTCCGC
ATCCTCAACG TGTTTTCGCT CGACGACGTG CGCAGCGCCT ACGGCCTGAC CAGCATCGTG
CCGGCCGCCC TTGCCAATCC CTGGCTGATG GGCACGGCGA TGCTGGCCTG GATCGTCGCG
CCGCTGGGCC TCGCGAGCTG GAGATTCAAG CCATGA
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| Protein sequence | METRQILTLA AKEFRDRLRN RWVLAVALVF AVFSLVIAYA GGAQQGTVGL RSIEFTIASL
VSLVIYLVPL IALLLGFDAI VGERERGSLD LLLALPITRG ELLLGKYLGL AAALALAMLA
GLALVGGVLG WQFGANGLFH YAGFVLSTLL MGLAFLSLAV LLSVLARDRT RASGLAIALW
FFFVLVFDLL LLGALVASGG QYGGAAFPYL LLLNPADVFR ILNVFSLDDV RSAYGLTSIV
PAALANPWLM GTAMLAWIVA PLGLASWRFK P
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