| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1401 |
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| Symbol | |
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| ID | 6160022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1488505 |
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| End bp | 1489659 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664155 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_001790434 |
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| Protein GI | 171058085 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACAG CAGACAAGGC GAACATCCTC CTCGTCGACG ACGAACCGGA GAACCTGTCT
GCCTTGCGCG TGCTGCTGGA CGGTGCCGAC CGTCACCTGC TGCTGGCCCA CGACGCCGAC
GCTGCACTGC GCTGCGCGAG CGAGCACGAT CTCGCCCTGA TCCTGCTCGA CGTGTGCATG
CCCGGCACGG ACGGTTTCGA GAGCGCGCAG ATGCTGCGTC GAAACGAGCG GTCGAGGCTT
GCGCCGATCA TCTTTCTGGC GACGTCGGCT GACGATCTGG CGTCGATCTC TCGCGGCTAC
GAGGTCGGCG CGGTCGACTA CCTGGTCAAG CCCCTGTTGC CCGAGGTGCT GCGCTCGAAG
GTGTCGGTGT TCGTCGATCT GCACCGCAAG AACACCGAGC TGCGCCATGA GGTGGCCGTG
CGCCGCAGCG CCGAGCGGCA GGTGCGCGAG TCCGAAGCGC GCCTGCATGC GCTGACCAGC
CACTTCATCA CCATGCGCGA AAAGGAGCGC ACCGCCATCG CACGCGAGAT CCACGACGAG
CTCGGCCAGG TGCTGACCGT GCTCAAGATG GACATCGCCT GGCTGGCCAG GCATCCCGAC
GATGCACGCC TGCGGGTCAA GACCGATGCG ATGAGCCGGC TCATCGACGA CACGATCCGC
TCGGTTCGCA AGATTTCAGC CGGGCTGCGG CCCGAGGTGC TCGACGACAT GGGCCTGGTC
TCGGCGATCG CCTGGCAGAC CACGGAGTTC CAGAAGCGCA CCGGCGTGCG TTGCCGCTCG
GCGCTGCCGC CCGAGACCGA GGTCTTCGAC AAGGACCTGT CGAACACCCT GTTCCGGATC
TTCCAGGAGA TCCTGACCAA CGTGGCGCGC CACGCACACG CCACGCGGCT CGATGTCGAA
CTGCGACAGG CAGGCGACCG GCTGGTGCTC AAGGTGGCCG ACAACGGCGT GGGCATCGTC
GTGCAAGAGG CCAACGCCCC GACCACCCTG GGGCTTCTGG GCATGCACGA GCGTGCGCTG
AGGCTCGGTG GCACGGTTGC GATCGACGGG GAGCCGGGCG CCGGGACACG CGTGCGGGTG
TCCATCCCGA TACCGGGCTC GCAACGCGAG CACGGGCGTG AATCACGCAG CGAACGAGCA
GAGGGGTTGC CATGA
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| Protein sequence | MPTADKANIL LVDDEPENLS ALRVLLDGAD RHLLLAHDAD AALRCASEHD LALILLDVCM
PGTDGFESAQ MLRRNERSRL APIIFLATSA DDLASISRGY EVGAVDYLVK PLLPEVLRSK
VSVFVDLHRK NTELRHEVAV RRSAERQVRE SEARLHALTS HFITMREKER TAIAREIHDE
LGQVLTVLKM DIAWLARHPD DARLRVKTDA MSRLIDDTIR SVRKISAGLR PEVLDDMGLV
SAIAWQTTEF QKRTGVRCRS ALPPETEVFD KDLSNTLFRI FQEILTNVAR HAHATRLDVE
LRQAGDRLVL KVADNGVGIV VQEANAPTTL GLLGMHERAL RLGGTVAIDG EPGAGTRVRV
SIPIPGSQRE HGRESRSERA EGLP
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