| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1394 |
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| Symbol | |
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| ID | 6159919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1481275 |
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| End bp | 1482252 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664148 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001790427 |
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| Protein GI | 171058078 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCG ACGGCGCCAG AATCCTCGTC ACGGGCGGGG CCGGGCTGAT CGGCTCGACC
ACCATCGACC TGCTGCTGCG CCAGCATGCG CCGGCGCAGA TCGTGATCCT CGACAACCTG
GTGCGCGGCT CGCTGGCCAA TGTCGAGTCG GCGCTGAGCG ACCCGCGCCT GCGCTTCGTG
CAAGGCGACA TCTGCGATGC CGAAACGGTG CGCCGCGCCA CCACCGGCAT GGACGCGGTG
ATCCACCTCG CCGCCCTGCG CATCACGGCC TGTGCGGCCG ATGCCCGGCG GGCAATGCAG
GTGATGTGCG ACGGCAGCTT CAACGTCGTC GAGGCGGCCC GCGAGGCCGG CGTGGCCAAG
ATCGTCGCGG CCTCGTCGGC GTCGATCTAC GGCATGGCCG ATTCGTTCCC GACCCGCGAA
GACCACCACC CCTACAACAA CCGCACCTGG TACGGCGCCA GCAAGGTGAT GCTCGAAGGC
CTGCTGCGCT CGTATCACGC GATGCACGCC CTGCCCTACA CGGCGATGCG CTACTTCAAT
GTCTACGGGC CGCGCATGGA CCTGCACGGC CAGTACACCG AGGTGCTGAT CCGCTGGATC
GACCGCATCG ACGCCGGCCT GCCGCCGCTG ATCCTCGGCT CGGGCCAGCA GACCATGGAC
TTCGTCTACA TCGACGATGT CGCCCGCGCC AACGTGCTGG CGCTGCGCTC GGATGCCGAT
GACGAGGTCT TCAACGTGGC CAGCGGCGTC GAGACGAGCC TGAATCAGCT CGCCGCCGCA
CTGCTCGACG TGATGGGCTC GAAGCTGCCG GTCGAATACG GGCCCGAGCG CCTCGTCAAC
GCCGTGCCGC GCCGGCTGGC CGACACCGAC CGGGCCGCTC GGCGGCTGGG CTTCCGATCG
CAGGTCGGGC TCGCCGAAGG CCTGGCGCGG CTGGTCGACT GGTGGCACAT GAACCGGTCG
AAGGCGGTGG CCGCATGA
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| Protein sequence | MNIDGARILV TGGAGLIGST TIDLLLRQHA PAQIVILDNL VRGSLANVES ALSDPRLRFV
QGDICDAETV RRATTGMDAV IHLAALRITA CAADARRAMQ VMCDGSFNVV EAAREAGVAK
IVAASSASIY GMADSFPTRE DHHPYNNRTW YGASKVMLEG LLRSYHAMHA LPYTAMRYFN
VYGPRMDLHG QYTEVLIRWI DRIDAGLPPL ILGSGQQTMD FVYIDDVARA NVLALRSDAD
DEVFNVASGV ETSLNQLAAA LLDVMGSKLP VEYGPERLVN AVPRRLADTD RAARRLGFRS
QVGLAEGLAR LVDWWHMNRS KAVAA
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