Gene Lcho_1375 details

Gene Information

• Locus tag: Lcho_1375
• ID: 6159757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1458232
• End bp: 1458888
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641664129
• Product: putative insertion element IS1016 transposase
• Protein accession: YP_001790408
• Protein GI: 171058059

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 51
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGAAG AGCAGAGCCA GCGCCTGTTC GAGTGTTTCG TGGCGGGCAC GCCGGCCCGG 
CCGGCGGCCG AGACGGTCGG TGTCAACCGC AACACCGCAC GGCTCTACTA CCACCGCCTG 
CGCGAGACGA TCGCCCATCA CATCGAGCGC GACGGGCGCT GGCGCGACGA GCCCGGCGCA 
ACACCGACCC TGGACGGCAG ACCGGTGGCG CCGGTGCAGG CCGGTGATGC GCCGGTCGTG 
CGGATCGTTC CGGTGGCCGG ACTGCTCGAA CGCGACGGCC GCGTCCACAT CGTGCCGATC 
GCCGAGCCGG CCACCGCGCC ATGGCCGGGG CCGGCGGTCG ACGCCATCGT GTGCTTCGAC 
CAGACCATCT CCCCCACCGA GCCCGCCGAG ATGCGCGACG GACGGATGCG GGTCGAGCTG 
GGCGACGCGC TGGCCGGCGA CCTGCCGCGG CGCAAGGTCG TCCGGGCGTT CTGGCAGTCG 
AGCGCGCGGC TGCTGCGGCG CTTCAACGGC GTGCCGCGGC AGCACCTGCT GCTGTACCTG 
AAGGAGTGCG AATGGCGCTT CAACGACGGC ACGCCCGAAG CGCGCATGAA CACGCTGCGC 
CTGTGGTTCA TGCGCTCGGA CCGGCGCTCG AGAAACCGGA CGACCGAATC GCCGTGA 

 

Protein sequence

MSEEQSQRLF ECFVAGTPAR PAAETVGVNR NTARLYYHRL RETIAHHIER DGRWRDEPGA 
TPTLDGRPVA PVQAGDAPVV RIVPVAGLLE RDGRVHIVPI AEPATAPWPG PAVDAIVCFD 
QTISPTEPAE MRDGRMRVEL GDALAGDLPR RKVVRAFWQS SARLLRRFNG VPRQHLLLYL 
KECEWRFNDG TPEARMNTLR LWFMRSDRRS RNRTTESP