| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1348 |
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| Symbol | |
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| ID | 6161373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1434494 |
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| End bp | 1436023 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664102 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001790381 |
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| Protein GI | 171058032 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TCGAACTGAA CGTCGACCTG AACCGGGTCG AGGGCGACCT GTCGATCCAG
GTGACGCTCG AAGACGGCGT GGTGGTGGCG GCCCGCACCG CCGGCACGAT GTACCGCGGC
TTCGAGCAGA TCCTGCTCGG GCGCACGCCG CGCGACGCGA TGGTGATCAC CCCGCGGGTG
TGCGGCATCT GCGGCACGGC GCATCTGTAT GCGGGCGTGC TGGCGCTGGA ACAGGCCTGG
AACACGCCGG TGCCACCCAA CGCGACGCGC ATCCGCAACC TGTGCCTGAT CGCCGAAGGC
CTGCAGAACG ACCTGCGGCA GACCTTCCTG TTTTTCGCGC CCGACCTGTG CCACCCGCGC
TACGCGGGCG ATGTGCTGTT CGAGCCGATG ATGCGGGCCT TCGAGCCGTT CAAGGGCGAC
ATCTACCGCG AGACGCTGGC GATGACACGC CGCGTGCTGG AGATCGTCGC GCACTTCGGC
GGCCAGTGGC CGCATTCGTC CTACATGCTG CCCGGCGGCG TGGTGACGCC GCCGGACACC
CGCCGGCTGA TCGCCTGCCG TTCGGTCATC GACCAGCTGC AGCGCTGGTA CGAGCAGCGC
ATCATCGGCG CCGGCCTGGA CGAATGGATG GCGCTCGGCT CGGCCGATGC GCTGTTCGAG
TGGCTGGAGC GCCCCGGCCC GGCCAACGCC GCGCTCGGGC TGATCACCCG CTTCCTGCGT
TCGCAGGGCA TGCACCGGCT GGGCATCGGC ACGCCGCACA TGATCTCGTT CGGCGCTTGG
TGCGACCCGC AGCGCTGGGG TCCACCTTAT GACGCGCACC TGCTGCCAGG CGGCTTCTAC
GACAGCGACA GCGGCCAGGT CCAGCCGCTC GACCCTTCGC TGGTGACCGA GCATGTGCGC
CACTCCTGGT TCAAGCCCTA CGAAGGCGGG CGCCATCCCT ACGAGGGCGA GACGGTGCCC
GACTACCAGC CCGACAGCGA CCGCTACAGC TGGGCCAAGG CGCCGCGCTA TGGCGGCCGC
GTGGTGCAGA CCGGCCCGCT GGCCGAGCTG CTGATCGGCG GCGACGCGCT GGTGCGCGAC
CTGCACGCCA CCGAGGGCGC GGGCGCCTGG CTGCGCCAGT TCTCGCGCGT GCGGCGCATC
GGCTTCGAAC TGCGCCAGGC ACGCCGCATG CTCGACGAGC TGGGCGCGCA TCTGGGCGAG
CCGCATTTCG TGCCGCCCGC GCCGGGTACC GAAGTCGACG GCCAGGGCTG CGGCCTGGTG
ATGGCCGCAC GCGGCGCGCT GGGGCATTGG GTGCGGATCG AAAACGGCGT GATCCAGAAG
TACCAGATCG TCACGCCCAC GGCCTGGAAC GCCTCGCCGC GCGACAGCGA CGGCGTGCCG
GGGCACTGGG AGTCGAGCCT GGTGGGGCTG AAAGTGCAGG ACCCCGACGA CCCGATCGAG
ATCGGCCACC TGATCCGCTC GCACGACCCC TGCCTGGTCT GCACGGTGCA CTTCGTCGAC
AGTGGCCGAC AGCTGACGAT TGGCGCGTGA
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| Protein sequence | MARIELNVDL NRVEGDLSIQ VTLEDGVVVA ARTAGTMYRG FEQILLGRTP RDAMVITPRV
CGICGTAHLY AGVLALEQAW NTPVPPNATR IRNLCLIAEG LQNDLRQTFL FFAPDLCHPR
YAGDVLFEPM MRAFEPFKGD IYRETLAMTR RVLEIVAHFG GQWPHSSYML PGGVVTPPDT
RRLIACRSVI DQLQRWYEQR IIGAGLDEWM ALGSADALFE WLERPGPANA ALGLITRFLR
SQGMHRLGIG TPHMISFGAW CDPQRWGPPY DAHLLPGGFY DSDSGQVQPL DPSLVTEHVR
HSWFKPYEGG RHPYEGETVP DYQPDSDRYS WAKAPRYGGR VVQTGPLAEL LIGGDALVRD
LHATEGAGAW LRQFSRVRRI GFELRQARRM LDELGAHLGE PHFVPPAPGT EVDGQGCGLV
MAARGALGHW VRIENGVIQK YQIVTPTAWN ASPRDSDGVP GHWESSLVGL KVQDPDDPIE
IGHLIRSHDP CLVCTVHFVD SGRQLTIGA
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