| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1323 |
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| Symbol | |
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| ID | 6163055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1409545 |
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| End bp | 1410903 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664077 |
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| Product | permease |
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| Protein accession | YP_001790356 |
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| Protein GI | 171058007 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACG CCCTGCAACT CGTCAACGGC GGCCTCGGCA ACCTGGCGGC CTACTTGGCG
GCGCACGTGC TGCTGTGTCT GCTGCCGGCG TTTTTCATCG CCGGGGCGAT GGCGGCGCTG
ATCCCCAAGG CCAGCATCAC GCGCTGGCTC GGCCGCAACA CGCGCCGCCA CGTGTCGTAC
CCGGCCGCGG CTGCGGCGGG CTCGCTGCTG GCGGTGTGCT CGTGCACGAT CGTGCCGCTG
TTCGCGGGCA TCCACAAGAA GGGCGCCGGG CTGGGGCCGG CGATCACCTT CCTGTTCTTC
GCGCCGGCCG GCAACATCCT GGCGCTGGCC TACACCGGCA GCATCCTGGG GGCCGAGTTC
GCGTTCGCCC GCTTCCTGCT GTGCCTGCTC TTCGGCATCG GCATCGGCCT GCTGATGGCG
CTGCTGTTCC GGCGCGACGA TGCCAGCCAC GACGCCCGGA CCGACGCGCT GTTCGCCGAC
CAGGCCCGCA TCGGCCCGGC CGCGGGCGGC GTGCTGCTGG CGCTGGTGGC GGTGCTGATC
GCCGGCACCT TGAAGGTGGC GCCGCTCAAC GCCACGCTCG CCACCTTGCA CCTGCCGCTG
TCGTGGGCCG AGCCCTGGCA GGCCACGCTG ATGCGCTGGG TGCCGTTCGA CGCCGCCCGC
GGCGAGGAGG GCGTGAGCGT GCAGGGCTCG CTGCTGATCG TGCTGCTGGT GGGCATCGGC
ATCACGGCCT GGAAGGGACT GGAGAACATC GTCGAAGGGC CCAACCGCTG GACCTGGCTG
GCGCTGGCGC TGGCCGGCAC CACGCTGCTG GCGGCCGCGC TGCGGCTGGT GCCGGGCGCC
GGCGGGCTGG CTGTCGTGCT GACCGGGCGC GTGTTCGCGG TCGCGCTGGC GCTGGCGGCG
GTGCTGTACT TCGCCCGCCA GCTCGATGCC GACAACCGGC AGGCCTGGCT GTGGGAGTCG
TGGCGCTTCG TCAAGCAGAT CTTCCTGCTG CTGGTGATCG GCGTGTTCCT GGTCGGCGTG
ATCCGCCAGC TGATCGAGCC CGCGTGGATC CGCACGCTGG CCGGCCGCAA CGACCTGCTG
GCCAATGCGG TGGCGGTGGG GTTCGGCGTG TTCATGTACT TCCCGACCCT GGTCGAGGTG
CCGGTGGCGC GCATGTTCCT GGACCTGGGC ATGCACCGCG GCCCGCTGCT CGCCTACCTG
ATGGCCGACC CCGAACTGAG CCTGCAGAGC ATGCTGATGG TCGCCGCCGT GATCGGCCGG
CGCCAGACCG TCGCCTACGT CGGCCTGGTG GCGGTCTTCA GCATCTGCGC CGGGCTGCTC
TACGGCGCCT GGGTCGACGG CCTGATTCCC CACCTGTGA
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| Protein sequence | MSYALQLVNG GLGNLAAYLA AHVLLCLLPA FFIAGAMAAL IPKASITRWL GRNTRRHVSY
PAAAAAGSLL AVCSCTIVPL FAGIHKKGAG LGPAITFLFF APAGNILALA YTGSILGAEF
AFARFLLCLL FGIGIGLLMA LLFRRDDASH DARTDALFAD QARIGPAAGG VLLALVAVLI
AGTLKVAPLN ATLATLHLPL SWAEPWQATL MRWVPFDAAR GEEGVSVQGS LLIVLLVGIG
ITAWKGLENI VEGPNRWTWL ALALAGTTLL AAALRLVPGA GGLAVVLTGR VFAVALALAA
VLYFARQLDA DNRQAWLWES WRFVKQIFLL LVIGVFLVGV IRQLIEPAWI RTLAGRNDLL
ANAVAVGFGV FMYFPTLVEV PVARMFLDLG MHRGPLLAYL MADPELSLQS MLMVAAVIGR
RQTVAYVGLV AVFSICAGLL YGAWVDGLIP HL
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