Gene Lcho_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1306 
Symbol 
ID6161005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1391400 
End bp1391960 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content69% 
IMG OID641664060 
Producthypothetical protein 
Protein accessionYP_001790340 
Protein GI171057991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.457256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA TCGTCAAGGC GGCACTGAAG AAATGGCCCG CCGTGCCGGC CTGCCGCGGC 
TGGCTGGCCC TGGATGCGCG TGGCGACTGG TATCTGCGCG ACGAGCAGGT CCAGGCACAC 
GGGCCGTTTC CGCAGGCCAA GGGCAGCCGC ATCGTGCACG ACAAGCTGCG CCAGTTCATC 
GAACGCAACT ACGAGTCCGA TGCCGACGGC TGCTGGTACT TCCAGAACGG GCCGCAGCGT 
GTCTACGTCG AACTCGAACT GGCGCCGCTG GTGATGGGCG TGCAGCGCAT CCCGGGCGGC 
TGGCAGGTGC AGTCGCACAC CGGTGTGACG GCCCACGAAC TGCGCGCGGT GCTGGTCGAC 
GAGCAGGGGC GGCTCTACCT CCACACCGAA CTCGGCCTTG GCCTGATGCG TTCGGCCGAC 
ATGGACGTGG CCGCCGATGC CGTGCTGGCG GGCGCCTGGT CGCCCCAGCC GGTCGACAGC 
CAGGCGCTGC CGCAGCACTA CGGCTACTGC GTCAGTCCGC AGGCCCGTGC CGTGAACCGC 
AGCGGCCCTG CTGCCGGCTG A
 
Protein sequence
MDDIVKAALK KWPAVPACRG WLALDARGDW YLRDEQVQAH GPFPQAKGSR IVHDKLRQFI 
ERNYESDADG CWYFQNGPQR VYVELELAPL VMGVQRIPGG WQVQSHTGVT AHELRAVLVD 
EQGRLYLHTE LGLGLMRSAD MDVAADAVLA GAWSPQPVDS QALPQHYGYC VSPQARAVNR 
SGPAAG