| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1293 |
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| Symbol | |
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| ID | 6160905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1376821 |
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| End bp | 1378353 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664047 |
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| Product | malonyl-CoA synthase |
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| Protein accession | YP_001790327 |
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| Protein GI | 171057978 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00112545 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCCA ACGCCAATCT CTTTGCGGCC CTGCGCGCCG CCTTCCCCGC CGACCTCGAC
GCCACCGCGA TCGAGACCGA CAACGGCCTG CTCTACAGCT GGGGCGACCT CGAGCGCGCC
ACCGCCATGC TGGCCAACCT GCTCGGTTCG CTGGAGATCC CGGCCGGCAG CCGCATCGCC
GTGCAGACCG AGAAGTCGGT CGAGGCGCTG ATGCTCTACC TGGCCACGCT GCGGGCGGGT
TTTGTCTACC TGCCGCTCAA CACCGCCTAC CAGGAGGGCG AGCTCGACTA CTTCATCGGC
AACGCCGAGC CGGCGGTGGT GGTGTGCGCC AGCCGGAGTT TTCCGTGGCT GAGCAAGCTG
GCGTTCCGCA AGGGCGTGGC GCATGTCTTC ACGCTCGACG ACGACCGCAG CGGCAGCCTG
CTCGACCGCG CCGCCTATTT CAGCGACCAG CACGTCGTCG CCCACAAGAA CGCCGACGAG
CTGGCCGCGA TCCTCTACAC CAGCGGCACC ACCGGGCGCA GCAAGGGCGC GATGCTCAGC
CACGGCAACC TGCTGAGCAA CGCGCAGGTG TTGAAGAAGT ATTGGGATTG GCAGCCTGGC
GACGTGCTGA TCCACGCGCT GCCGATCTTC CATGTGCACG GCCTGTTCGT CGCCAGCCAC
GGCGCGCTGC TCAACGGCAG CAAGATGCTG TGGCTCGCGA AGTTCGACCC CAAGGCCGTG
GTCGAGCGCC TGCCGCGCGC CAGCGTCTTC ATGGGCGTGC CCACGCTCTA CGTGCGGCTG
CTGCAGGAGC CGGTGCTCAC GCGCGAAGCA TGCGCTCACA TGCGGCTGTT CATCTCGGGC
TCGGCGCCGC TGCTGATCGA GACCTTCCGC GACTGGCAGA CCCGCACCGG CCACACCATT
CTCGAGCGTT ACGGCATGAG CGAGACGGCG ATGCTGACGT CCAACCCGTG TCGTGCCGAA
GACGGCGACC GGCTCGGCGG CACCGTCGGC CCGGCGCTGC CGGGCGTGGG CGTGCGGGTG
GTCGACGATG CCGGCGCGGC GCTGGCGGCG GGCGAGATCG GCAACGTGCA GGTGCGCGGG
CCCAACGTCT TCGGCGGCTA CTGGCGCATG CCCGAGAAGA CCGCCGAGGA GTTCACGTCC
GACGGCTGGT TCAGGACCGG CGACGTCGGC CGCTTCGACG GACTCGGCTA CCTGACCATC
GTCGGCCGCA GCAAGGACCT GATCATCAGC GGCGGCTACA ACGTCTACCC CGCCGAGATC
GAGGGCACGC TCAACGAGCT GCCCGGCGTG GCCGAATCGG CGGTGATCGG CGTGCCGCAC
CCGGACTTCG GCGAAGCGGT GGTGGCGGTG ATCGTGGCCA AGGCCGGCGC GAGCCTCGAC
GCCGACGCGC TGGTGGCGCA GCTCAAGCGC CAGATCGCCA ACTTCAAGGT GCCCAAGCGC
GCCTTCGTGG TGGCCGACCT GCCGCGCAAC GCGATGGGCA AGGTGCAGAA GAACCTGCTG
CGCGAGCAGC ACAAGGCGCT GTTCATGCCG TGA
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| Protein sequence | MTANANLFAA LRAAFPADLD ATAIETDNGL LYSWGDLERA TAMLANLLGS LEIPAGSRIA
VQTEKSVEAL MLYLATLRAG FVYLPLNTAY QEGELDYFIG NAEPAVVVCA SRSFPWLSKL
AFRKGVAHVF TLDDDRSGSL LDRAAYFSDQ HVVAHKNADE LAAILYTSGT TGRSKGAMLS
HGNLLSNAQV LKKYWDWQPG DVLIHALPIF HVHGLFVASH GALLNGSKML WLAKFDPKAV
VERLPRASVF MGVPTLYVRL LQEPVLTREA CAHMRLFISG SAPLLIETFR DWQTRTGHTI
LERYGMSETA MLTSNPCRAE DGDRLGGTVG PALPGVGVRV VDDAGAALAA GEIGNVQVRG
PNVFGGYWRM PEKTAEEFTS DGWFRTGDVG RFDGLGYLTI VGRSKDLIIS GGYNVYPAEI
EGTLNELPGV AESAVIGVPH PDFGEAVVAV IVAKAGASLD ADALVAQLKR QIANFKVPKR
AFVVADLPRN AMGKVQKNLL REQHKALFMP
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