Gene Lcho_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1290 
Symbol 
ID6160389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1374576 
End bp1375169 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID641664044 
Producthypothetical protein 
Protein accessionYP_001790324 
Protein GI171057975 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0000115526 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCACG CACTCGACAC CCTCGCCCTG AACCAGCTGT TCACCGAAGC GCGCACCCAC 
AACGCCTGGC GCGACGAGCC GGTGGCGCCT GAACTGCTGC GCCAGCTGCA CGAGCTCGCC 
AAATGGGGGC CGACGGCGAT GAACTGCTGC CCGCTGCGGG TCCGGTTCAT CGTCGGCGCC 
GAGGCGCGTG CGCGCCTGCT GCCGCTGATG AGCGAGGGCA ACCGCGCCAA GACTGCCGCC 
GCGCCGGTGA TCGCCATCCT CGGCCGTGAT GTCGATTTCC ATCAGCACAT GCCGACGCTC 
GCGCCGCACA TGGCCGGCGC CCGCGAGCGG TTTGCCGATC AGCCGGCGCA GCGCGAGGCG 
ATGTCGCAGC TCAACGGCGC ACTGGAAGCG GGCTACTTCA TCCTGGCCGC GCGCGCGCTC 
GGGCTCGACT GCGGGCCGAT GGGCGGTTTC GACGCCGCGG CGGTCGATGC CGAGTTCTGG 
GCCGGCACGG CGGTGCGCTC GATGATCGTC TGCAACCTCG GCCACGGTGA CCCGGCCGGC 
CTGCGCCCGC GTGCGCCGCG GCTCGATTTC GACACCGCCT GCGCCGTGCT GTGA
 
Protein sequence
MTHALDTLAL NQLFTEARTH NAWRDEPVAP ELLRQLHELA KWGPTAMNCC PLRVRFIVGA 
EARARLLPLM SEGNRAKTAA APVIAILGRD VDFHQHMPTL APHMAGARER FADQPAQREA 
MSQLNGALEA GYFILAARAL GLDCGPMGGF DAAAVDAEFW AGTAVRSMIV CNLGHGDPAG 
LRPRAPRLDF DTACAVL