Gene Lcho_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1259 
Symbol 
ID6162916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1345906 
End bp1346406 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID641664013 
Productdihydrofolate reductase 
Protein accessionYP_001790293 
Protein GI171057944 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000117579 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGCA TCGTGCTGAT CGCCGCCGTG GCGCGCAACG GCGTGATCGG CCGTGACAAC 
GACCTGCCCT GGCGCCTGCC GGAAGACCTG CAGTTCTTCC GCCGCACGAC GATGGGACAT 
CCGGTGCTGA TGGGCCGGCG CAACTGGGAC TCGCTGCCGG CGAAGTTCCG CCCGCTGCCC 
GGGCGCCACA ACCTCGTGCT GACGCGCAAT CCGGACTGGC GCGCCGAGGG CGCCACCGTC 
GTGCACAGCC TGGCGCAGGC GCTCGATCAG CTGGGCGATG TGCCCACGCT GTTCGTCATC 
GGCGGCGGCG AGCTGTACCG GCTGGCGCTG CCGCTGGCCG ACGAGATCAT CCTCACCGAG 
ATCGACCGGG CGGTCGACGG CGACGTGTTT TTCCCGCACT GGGACCGCAG TGCCTTCGAG 
GTGCTGTCCC GCGAAACGCA CGCAGCCGAT GGCAGTGATG CCATCGGCTA CGAACGCGTG 
CACCATCGCA AAAAGCCCTG A
 
Protein sequence
MTRIVLIAAV ARNGVIGRDN DLPWRLPEDL QFFRRTTMGH PVLMGRRNWD SLPAKFRPLP 
GRHNLVLTRN PDWRAEGATV VHSLAQALDQ LGDVPTLFVI GGGELYRLAL PLADEIILTE 
IDRAVDGDVF FPHWDRSAFE VLSRETHAAD GSDAIGYERV HHRKKP