Gene Lcho_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1253 
Symbol 
ID6161097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1341067 
End bp1341528 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content73% 
IMG OID641664007 
Productrhodanese domain-containing protein 
Protein accessionYP_001790287 
Protein GI171057938 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000299854 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACCG ATTCCCCGAT CGTCGAACCG TCATCCCTTC GCCGTGTTTC CCGGCGTCGT 
CTTGCGTGGC TGGTCCTGGC CACGGCCGCG CTGGGCGTGG CGGGCTGTGG CGAGGCCGGC 
GCATCGGCCG ACGCCGTCAG CCTGGACTTC GCACGCGCCG AGCACGAGAG CGGGCGCGCC 
GTCCTGATCG ACATCCGCGA GCCCGACGAG CACGCCACCG GCGTGGCCGC AGGGGCGCGG 
TTGTTGCCGA TGCGGCAACT GGGTCGGCGG TTGGCCGAGA TACCGGCCGA CCCCGCCCAG 
CCGGTGCTGC TGATCTGCAA TACGCAGAAC CGGTCGAGCG CGACGCTGCG TGCGCTGCGC 
GAGCGCGGCT ACGGGCATGT GCGCTACGTG CAGGGCGGCA TGAGCGAATG GGCCCGTCGC 
GGCTGGCCGA TGGTCAGGCC GGCCGGCCGA TCCGGCGACT GA
 
Protein sequence
MRTDSPIVEP SSLRRVSRRR LAWLVLATAA LGVAGCGEAG ASADAVSLDF ARAEHESGRA 
VLIDIREPDE HATGVAAGAR LLPMRQLGRR LAEIPADPAQ PVLLICNTQN RSSATLRALR 
ERGYGHVRYV QGGMSEWARR GWPMVRPAGR SGD